Strain | Pseudomonas fluorescens strain AU11235 Contig_40, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
TTTTCTGACGATCTTCATGGAACCAGGCGTTAACCAGCACGTCGTAACGACCGTTTTGTATCCCTTGCAACGCCCTGGCCCACGGCACTTGCTCAAAAGC GCTGGGGTAACCGGCCCGCGCAAGGGCCGTGCTGACCAGATCGGTGGCCAGCCCGCCATTGACCAGCGTGCCATCGGTAAACGGCGGCCAGTGATCGCCC ACCAGGCGCAGCGTGTCGGCGCTGGCGTGATGAGCCCATAAGGTCAATCCAGACACAATCAAAGCTCTGCGCAAGCGAGACATGCAAGATCCTTAAGGGG CTGCCCACTATTATTTAGCTGCCATTTATTGGGTCTCATCCTGATCAGCGTCAAGGGATGAAGGCCCGGGCCACTTAAAGATAACCCCCAATCGCGGTAG GTTGATATCAAAAAGCCTTATCTGCTGACACTTTTACGCTTGGCCTGCTTTGCCATTCGCGCCTAGTATCTGGCGATTGCCACTCTTTCAGGACAACACC
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DNA Sequence for Gene |
>AA056_RS19415
GTGACCACTGACTGGATCTGTAAACACCACTCTGACCTGGGTAAAGAACAGCTGTACGCCATTTTGAAGCTGCGCTGCGAAGTGTTCATCGTTGAACAGG AATGCGCCTATCTGGACATCGACGGGCAGGATCTGGAAGGTGACACGCTGCACCTGATGGGCTGGCAAAACGATCAACTGGTGGCGTATGCCCGCTTGCT CGACCCTGAGTCCCATGCCGGGGACGTGGTGATTGGCCGGGTAATTGTTGCACCGCAGGCACGTGGGCAGAGCCTGGGCCATGATTTGATGGACCAGGCG CTGCATAACATCAAAGAAAACTGGCCGCAGGAGCCTGTCTTCCTGTCCGCCCAGGCGCACCTGCAATCGCTGTACGCCAAGCACGGTTTTAACGCCGTGG GCGAGCCCTACTTCGAAGACAACATCCCGCATATCGGCATGCGCCTGAACGCCGACGCTCAGGGGTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
TTCAATACCTGCTTGATCTGCTCCACCTGTCGGGCGACCCAACTTTTATCAATCGGGCCCCAACTGCGGATCACGTAGCGCCCGGCGTGATTGCGGGCGC CGTCCTCTTGTTCGAATTCGCACAGGATGTCCAGGTCAGCGAGCGCTGCAAGGGTGTCCTGCGCCGTGCGGCGGGGCATGCCGGTCACTTCGGTGAGCGC CGGCACATTGCTGGCCCGTTGGGTATCAATCAACCAGGCCACATACAGGCGCCGGTAAAAGCTGCTTTTGGTTTTACTGACGTCCATTGATCACTCCTGT CACACGTTGGATTGCCGACTGCGCGAACCGGTGCGCGGCCGCCGGTCAAGTCAGGGTTTGCCCTGCATGTCACGCCACGTCAGGTACACCCGCAAGTCGA ATTCCAGCTGGTGGTAGTCGGGCAACATGTACTGGCACAGTTTGTAGAACGCTTTGTTGTGGTCCGATTCTTTCAAGTGGGCCAACTCGTGGACGACGAT
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Amino Acid Sequence |
>acyltransferase
MTTDWICKHHSDLGKEQLYAILKLRCEVFIVEQECAYLDIDGQDLEGDTLHLMGWQNDQLVAYARLLDPESHAGDVVIGRVIVAPQARGQSLGHDLMDQA LHNIKENWPQEPVFLSAQAHLQSLYAKHGFNAVGEPYFEDNIPHIGMRLNADAQG
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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