Pseudomonas fluorescens AU11235, AA056_RS19340

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas fluorescens strain AU11235 Contig_40, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
ACAACTGCACTTCGACGCGTTGCACCTGTTGCAGTTGATCGCGCTCGCGCAACCCTTGCACGAACAACGCCGCCGCCCGCATCGGCCCTACGGTGTGGGA GCTGGAGGGGCCAATGCCAATCTTGAACAGGTCAAACACGCTGATAGCCATGTGCACAAACCTCGGGGGATGAGTGCGCCCATCATCAGCCCTCTTGCGC CGCGCAAAACGTCCACCTGCGACCCACGGTTGCCCGCCAGCGCCTTCGCCGTTTTAAACGCGGGCGCGACGCTAAACACGCGGTTTTCAGGCGATAAATT TCCAGATACGACCTCGCAGGCATCAGATACGACCCTCCCTGTACTGGATGCGACGCTCCCTGTAGGCGTTTGAATTTGACTGTTACATGATCGTTCTTGA CTCGATTGCACGATGCCCGGTCAGCCCGGCATTGCCCAACCGCAACTGATACGTACGGTTTCACGCTCGAAACCGCCCCACGAACGCCAGGAGTCGAACC
DNA Sequence for Gene
>AA056_RS19340
ATGAACCACACCCGATCAGTGTTGTTGGCTGCACTGTTGAGTCTGCCGGTCATCACCCACGCCGCCGAACCTGCGCAATGCGCCACGGTGAACTTCTCGG ATGTCGGCTGGACAGACATCACCGTCACCACCGCCGTCGCCAGCACGTTGTTGGACGCACTCGGTTACACGACTAAAACCACCATGATTTCGGTGCCGGT CACCTACAAGTCGCTGGCGGACGGCAAGAACATGGACGTGTTTTTGGGCAACTGGATGCCGACCATGGAGAACGACATCAAGCCGTATCGCGACGCCGGG ACGGTGGAGACCGTGCGCGCCAACCTGGAGAACGCCAAGTACACGCTTGCCGTCCCTGAAGCGCTCTACAACAAGGGCTTGAAGGACTTTGCCGACTTGC CGAAGTTCAAGCAGGAACTGGGCGCGAAGATCTATGGCATCGAGCCCGGCAATGACGGCAATCGCATGATCCAGACCATGATCGACAAGAACGCGTTCGG CTTGAAAGACGCCGGGTTCAAAGTGGTGGAATCCAGCGAGGCGGGGATGCTGTCGCAGGTCGACCGCGCGCAGCGCCGTGGCACTGACGTGGTGTTTCTG GGCTGGGAACCGCACCCGATGAACACCCGTTTCAAAATGAAATACCTCACCGGCGGTGACGATTTCTTTGGACCCAATTATGGGCAGGCCACCATCTACA CCAATACCCGCAAGGGCTATTCCGAGGAGTGCAGCAACGTGGGTCAGTTGCTGAAAAACCTGGTGTTCAGCCTGGACATGGAAAGCACCTTGATGGGCGA GGTGCTGGATAAAAAGATCAAGCCAAACGTGGCCGCCAAGGCGTGGCTCAAACAGAACCCGCAGGTGCTCGACACGTGGTTGGCGGGCGTGACAACGCTG GATGGCAAACCGGGTCTGGAGGCCGTGAAAGCCAGCCTTGCGCAGTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TTGCGGGCGCCGGGCAACGGGTTTGCCGGGCGCCGTTTCCATTCCCCCTGCATGCGGACGTTCACTACCATGCTGATCGATCAAAAAATCCCTTTAGGCC AGTACATTGCGGGCTTTGTCGACTGGTTGACGCAACACGGCGCCAGCACGTTCGATGCCATCGCGACGTCGCTGGAAACGATGATCCACGGCGTGACGTT TGCGCTGACCTGGTTCAACCCTTTTGTCTTTATCGGGCTAATCGCCCTGCTGGCGCATGTCATCCAGCGCAAATGGGCGCTGACGGTGTTTGTGGCGCTG TCGTTTCTGCTGATCCTGAACCTGGGCTATTGGCAGGAGACCATGGAGACCCTGGCGCAGGTGCTGTTTGCCACGTTCGTGTGCGTGATTATCGGGGTGC CGCTGGGGATTCTCGCGGCGCACAAACCCATGTTCTACACTTTTATGCGACCGGTACTGGATCTGATGCAGACCGTTCCTACGTTCGTTTACTTGATCCC
Amino Acid Sequence
>glycine/betaine ABC transporter substrate-binding protein
MNHTRSVLLAALLSLPVITHAAEPAQCATVNFSDVGWTDITVTTAVASTLLDALGYTTKTTMISVPVTYKSLADGKNMDVFLGNWMPTMENDIKPYRDAG TVETVRANLENAKYTLAVPEALYNKGLKDFADLPKFKQELGAKIYGIEPGNDGNRMIQTMIDKNAFGLKDAGFKVVESSEAGMLSQVDRAQRRGTDVVFL GWEPHPMNTRFKMKYLTGGDDFFGPNYGQATIYTNTRKGYSEECSNVGQLLKNLVFSLDMESTLMGEVLDKKIKPNVAAKAWLKQNPQVLDTWLAGVTTL DGKPGLEAVKASLAQ
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site