Strain | Pseudomonas fluorescens strain AU11235 Contig_15, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CCGAAGACGGGCTGAGCATGTCGATCAGGCGCACGTCAAAGTCGCGTGCCAGATAGTCCATGCGGTTGTCGAAAAACTGCTTCATGTGCGGCAGGTTTTC ATGCACGGCCAAGTGCTCGCGGGACTGCCAGATCTCATAAAAGATGAACAGGGTGGGGTCTTGCTGATCGCGCAGCATGTGGTACTCGATGCAGCCGGGT TCCAGACGGCTAGGCGCCACGTAGGAACGAAACAGCGCTTCAAAGGCGTCAGCTTTTTCGGGTTTGGTGTGGGCGTGCAGAATAAATCCGTGCAATGGGC GCATCTCGTCGGCTCCTCAGGTCAGTGGTTTCGAGAGGATAAGGCAACAATGCGATGGGTATTTGTGACTATTGAGCAAATGTTATTTGCCGCGGCACGG GTATTTCCTAAAGGAAGGAATCGTTACTGTGCCGGTCACTTTTAAACCTTTAACTCCAACGCCGCTCAACAGCGCAGAGGGTTTATTCACGAGGCTGATG
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DNA Sequence for Gene |
>AA056_RS15425
ATGAAAAAAATACTCTTGCTCAACGGTGCCAAAAAATTTGCGCACTCGGACGGTCGTTACAACCAGACCCTGCACGACACCGCACTGGCATTTTTCGACC GCAATGGCTTTGACGTCAAAGTCACCCACATCGACGAAGGCTACGACGTGGCCGAAGAGGTGCAAAAGTTTCTGTGGGCCGACGTCATCATTTATCAAAT GCCCGGCTGGTGGATGGGCGCCCCGTGGATCGTTAAAAAATACGTCGACGAAGTGTTCACCGAAGGCCATGGCAGTTTGTACGCCAGTGATGGCCGCACG CGCTCCGATGCGTCCCAGCGCTATGGCAGTGGCGGTTTGATCCACGACAAAAAATACATGCTGTCCCTGACTTGGAATGCGCCGCAGCAAGCGTTTGACG ATCCGGCCGATTTCTTTGAAGGCAAGGGCGTCGATGCGGTGTATTTTCCATTCCACAAAGCCAACCAGTTTTTGGGCATGAGTGGTTTGCCGACCTTCCT GTGCGTTGACGTGATGAAGCGTCCGCAGCCTGAAGTGGATGCTGCCCGCTACGAGCAACACCTCATCGACGTGTTTCTTCGGTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
CGAGAGGCTCGCAGCCGCGCGCTGCCCGGCAGCGACTACCATGACTGGCTATTCAATGAGGGACGCGTGTGAAAGCCAGATCGGATGAGTTGCAAATCTT TGTGTCGGTGATCGAGTGCGGCTCAATCTCAGCCGCCGCCGAACATGCCGGGCAGACACCGTCTGCCGTCAGTCGCACGTTGTCGCGGCTTGAAGCCAAG CTCGAGACCACGCTGATCAACCGCACCACGCGGCGCATGGACCTGACCGAGGAGGGCAAGTTTTTCTTCGAGCGTGCCAAGCAGATCCTTGAGCAAATGG ACGAACTCGAAGAGCGCCTGATCGCTCACCAGCGCACGCCGTCCGGGCGCCTGCGCATCAATGCCGCGTCCCCGTTCATGCTGCATGCCATCGTGCCATA CATCCCCGAGTTTCGTGAGCTGTACCCGGACATTCAGCTGGAGCTCAACAGCAACGACCTGATTATCGACTTGCTGGAGCAAAGCACCGACATTGCCATT
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Amino Acid Sequence |
>NADPH quinone reductase MdaB
MKKILLLNGAKKFAHSDGRYNQTLHDTALAFFDRNGFDVKVTHIDEGYDVAEEVQKFLWADVIIYQMPGWWMGAPWIVKKYVDEVFTEGHGSLYASDGRT RSDASQRYGSGGLIHDKKYMLSLTWNAPQQAFDDPADFFEGKGVDAVYFPFHKANQFLGMSGLPTFLCVDVMKRPQPEVDAARYEQHLIDVFLR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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