Pseudomonas fluorescens AU11235, AA056_RS06985

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas fluorescens strain AU11235 Contig_13, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
TGAACTTTGTCGACAACCAGGTCAACCCCAAAACCGGCACCATCCGTGGCCGCGCGGTGTTCGACAATGCCGACGGCAGCTTCACGCCGGGGCTGTATGC GCGCCTGAAGCTGGTGGGCAGCGGTACCTACTCCGCCGTGCTGATCAACGACGAAGCGGTCGGCACTGACCTGGGCAAGAAGTTCGTGCTGGTCGTGGAT GGCGACAACAAGTCGATCTACCGCGCTGTGGAGCTGGGCCCGAAAATCGAAGGGTTGCGCATCGTGCGTAACGGCCTGCACAAGGACGACACCATCGTCG TCAAAGGGTTGCAGCGGGTGCGTCCCGGCTCGCCGGTCACCCCTGAAATGATCCCGATGGCCACCGAACAAACCCTCGCCGCACTGGCACTTCAACGACA AGCCCTGGAAGCCAGCAACCTGCCCCCAGTCAAGCCCGCCAACGGCGCGCCAAAGCTGGCCGGTGTCGCGACTCCTCGTGGTTAAGGGACGATAACTCCG
DNA Sequence for Gene
>AA056_RS06985
ATGAATTTTTCCCAGTTTTTCATTCAGCGGCCGATTTTCGCCGCTGTGCTTTCCCTGCTGATCCTGATTGCGGGCGGCATTTCGCTGTTCCAGTTGCCGA TCAGTGAATACCCCGAAGTCGTGCCGCCTACGGTTGTCGTGCACGCCAACTTCCCGGGTGCCAACCCGAAAGTGATCGGTGAAACCGTGGCTGCGCCGCT GGAACAGGCCATCACCGGCGTGGAAAACATGTTGTACATGTCTTCCCAGTCCACGGCCGACGGCAAAATCACGCTGACCATTACCTTCGCGCTGGGCACT GACCTGGACAACGCGCAGGTGCAGGTGCAAAACCGTGTGACCCGCACCCAGCCCAAGTTGCCCGAAGAAGTCACGCGCATTGGTATTACTGTCGACAAGG CCTCGCCTGACTTGACGATGGTGGTGCATTTGACCTCGCCGGATCAGCGCTACGACATGCTGTACCTGTCCAACTACGCCATCCTTAACATCAAGGACGA ACTGGCGCGCCTCAATGGTATTGGCGACGTGCAAATGTTCGGCATGGGCGATTACTCGCTGCGTGTCTGGCTGGACCCGAACAAAACCGCGTCACGCAAC CTGACCGCGACCGATGTGGTCACCGCCATTCGCGAACAGAACCGTCAGGTCGCGGCCGGTGCCCTGGGCGCGCCCCCTGCCCCGAATGCCACCAGCTTTC AGTTGTCGGTCAACACCCAGGGACGGCTGGTCACTGAAGAAGAATTCCAGAACATCATCATTCGCTCCGGTGACGATGGTCAGATCACTCGCCTCAAAGA CATCGCCCGGGTGGAGCTGGGCTCCAGTCAATATGCCTTGCGTTCGTTGCTCAACAACCAGCCCGCAGTGGCGCTGCCGATCTTCCAGCGGCCGGGCTCC AACGCCATTGATATTTCGAACGACGTCCGGGCGAAGATGGCCGAGCTCAAGCAGAGCTTCCCCGAAGGCATGGACTTCGACATCGTCTACGACCCGACCA TCTTTGTTCGCGGCTCCATCGAGGCCGTGGTTCACACCCTGTTCGAAGCCCTGATCCTCGTGGTGCTGGTGGTCATTCTGTTCCTGCAGACCTGGCGCGC CTCGATCATCCCGCTGGTGGCCGTGCCTGTTTCGTTGATCGGCACCTTTGCCGTGATGCACCTGTTCGGCTTCTCGCTCAACGCGTTGTCTCTGTTCGGG TTGGTGTTGGCCATCGGTATCGTGGTCGACGACGCGATCGTGGTAGTGGAAAACGTCGAACGTAACATCGAGCTGGGGCTTAATCCGGTCGACGCCACCA AGCGTGCGATGCGCGAAGTGACCGGCCCGATCATCGCCACGGCGTTGGTGCTGTGCGCCGTGTTTGTGCCCGCCGCCTTTATTTCTGGCCTGACCGGCCA GTTCTATAAACAATTCGCGCTGACCATCGCCATCTCCACGGTGATCTCGGCATTCAACTCGCTGACCCTGTCTCCGGCGCTGGCCGCGGTGCTCCTCAAA GGCCATCATGCGCCGAAAGACCGTTTTACCCGCCTGCTCGATCGCCTGTTCGGCGGCTGGCTGTTTGGTCCATTCAACCGCTTCTTCGTCAAGGCCAGTC ATGGTTATGTCGGGGCGGTACGCCGGATCATCCGTGGCAGCGGTATCGCGATGTTGCTGTATGCAGGCTTGATGGTGCTGACGTGGGTCGGTTTTGCTCA CACGCCGACCGGTTTCGTTCCCCCGCAAGACAAACAGTACCTGGTGGCTTTTGCGCAACTGCCGGATGCCGCAAGCCTGGATCGCACGGAAGCGGTGATC AAGCGCATGTCCGAAATCGCCCTCAAGCAACCCGGCGTGGCGAACTCCGTGGCATTCCCGGGCCTGTCGATCAACGGCTTCACCAACAGCCCCAACAGCG GCATCGTGTTCACCCCGCTCAAGCCCTTTGATGAGCGCAAGGACCCGAGCCAGTCGGCAGCGGCGATTGCCGCAGCCTTGAATGCGCAATTCGCTGACAT TCAGGATGCCTACATCGCAATCTTCCCGCCGCCGCCAGTACAAGGGCTGGGCACCATTGGCGGTTTCCGCCTGCAAGTCGAAGACCGCGGCAACCTGGGC TATGACGAGCTGTACAAAGAAGTGCAGAACATCATCACCAAGAGCCAGAACGTGCCTGAGCTGGCGGGTTTGTTCACCAGTTATCAAGTGAACGTGCCGC AAGTGGACGCCGCCATCGACCGCGAAAAAGCCAAGACTCACGGTGTGGCCATCAGTGACATCTTCGACACGCTACAGATCTATCTGGGTTCGCTGTATGC CAACGACTTCAACCGCTTTGGCCGTACTTATCAAGTCAACGTGCAGGCTGAGCAGCAGTTCCGCCTGGCACCTGAGCAGATCGGTCAGTTGAAAGTGCGT AATAACAAGGGCGACATGATCCCGCTGGCGACCTTTATCAAGGTCAGCGACACCGCCGGTCCCGACCGTGTCATGCACTACAACGGTTTTGTCACCGCCG AGATCAACGGCGCAGCAGCACCGGGCTACAGCTCGGGTCAGGCTGAAGCCGCGATTGAAAAATTGCTCAAGGAAGAACTGCCTAATGGCATGACCTACGA GTGGACCGAGCTGACTTATCAGCAAATTCTGTCAGGCAATACTGCGTTGTTTGTATTCCCGCTCTGCGTACTGCTGGCGTTTTTGGTACTCGCCGCGCAG TACGAAAGCTGGAGCCTGCCGCTGGCGGTGATCCTGATCGTGCCCATGACCCTGCTGTCGGCGATTACCGGGGTGATTATGTCCGGCGGTGACAACAACA TCTTTACCCAGATCGGCTTGATCGTACTGGTCGGACTGGCGTGCAAAAACGCGATTCTGATTGTCGAGTTCGCCAAGGACAAACAGGAAGAAGGCCTCGA CCCGCTGGCGGCGGTACTGGAAGCCTGCCGCCTGCGTCTGCGGCCGATTCTGATGACCTCGTTCGCGTTCATCATGGGCGTGGTGCCCTTGGTGCTGTCG AGCGGCGCGGGTGCGGAAATGCGCCATGCCATGGGCGTCGCGGTGTTCTCCGGGATGCTGGGCGTGACCTTCTTCGGCTTGCTCCTGACCCCGGTGTTCT ACGTGTTGATCCGCCGCTACGTGGAGCGCAGTCAAGCGCGCAAAGCCGCCCGGCACATGAAGCTGGAGTCCCAACAATGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GCCGTAACCTATTTCTTCCGAGCCTGTTGGTGCTGGCGTTAAGCGCGTGCGCCGTGGGCCCGGACTATCACACGCCCAAGACCGAGCCTGCGCAGATCAG CGCCGAGTACCTCAAGGGCTTCGACCGTGCGCATTTTGAAGGGATCTGGTGGCAACAGTTCGACGACCCGACCCTCAACCAGTTGGTGACGCAGTCGCTG GCAGGCAACCGCGAGCTGCGGGTGGCGTTTGCCCGTCTGCGGGCTGCACGGGCCATCCGCGATGACGTCAGCAATGACGCGATGCCGACCATTACCAGCC GCGCCAGCAGCGATCTGGGCAAGGGGCAGATTCCGGGGCAGACCGATGAACGCGTCAACAGCGAGCGCTACGACCTAGGGCTGGACATGGCGTGGGAACT CGACCTGTTTGGCCGTATCCAGCGTCAACTGGAAGCCAGCGACGCAGACGAACAAGTCGCCGCTGCGGATTTGTATCAGTTGCAAGTGACCCTGATCGCA
Amino Acid Sequence
>transporter
MNFSQFFIQRPIFAAVLSLLILIAGGISLFQLPISEYPEVVPPTVVVHANFPGANPKVIGETVAAPLEQAITGVENMLYMSSQSTADGKITLTITFALGT DLDNAQVQVQNRVTRTQPKLPEEVTRIGITVDKASPDLTMVVHLTSPDQRYDMLYLSNYAILNIKDELARLNGIGDVQMFGMGDYSLRVWLDPNKTASRN LTATDVVTAIREQNRQVAAGALGAPPAPNATSFQLSVNTQGRLVTEEEFQNIIIRSGDDGQITRLKDIARVELGSSQYALRSLLNNQPAVALPIFQRPGS NAIDISNDVRAKMAELKQSFPEGMDFDIVYDPTIFVRGSIEAVVHTLFEALILVVLVVILFLQTWRASIIPLVAVPVSLIGTFAVMHLFGFSLNALSLFG LVLAIGIVVDDAIVVVENVERNIELGLNPVDATKRAMREVTGPIIATALVLCAVFVPAAFISGLTGQFYKQFALTIAISTVISAFNSLTLSPALAAVLLK GHHAPKDRFTRLLDRLFGGWLFGPFNRFFVKASHGYVGAVRRIIRGSGIAMLLYAGLMVLTWVGFAHTPTGFVPPQDKQYLVAFAQLPDAASLDRTEAVI KRMSEIALKQPGVANSVAFPGLSINGFTNSPNSGIVFTPLKPFDERKDPSQSAAAIAAALNAQFADIQDAYIAIFPPPPVQGLGTIGGFRLQVEDRGNLG YDELYKEVQNIITKSQNVPELAGLFTSYQVNVPQVDAAIDREKAKTHGVAISDIFDTLQIYLGSLYANDFNRFGRTYQVNVQAEQQFRLAPEQIGQLKVR NNKGDMIPLATFIKVSDTAGPDRVMHYNGFVTAEINGAAAPGYSSGQAEAAIEKLLKEELPNGMTYEWTELTYQQILSGNTALFVFPLCVLLAFLVLAAQ YESWSLPLAVILIVPMTLLSAITGVIMSGGDNNIFTQIGLIVLVGLACKNAILIVEFAKDKQEEGLDPLAAVLEACRLRLRPILMTSFAFIMGVVPLVLS SGAGAEMRHAMGVAVFSGMLGVTFFGLLLTPVFYVLIRRYVERSQARKAARHMKLESQQ
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site