Pseudomonas fluorescens AU7350, AA040_RS05930
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas fluorescens strain AU7350 Contig_7, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GGGCTTGAGCTCATTGGTGAGTTGCGCCAGCGTGGCAAGACGTTCCCGATCCTGATTCTGACCGCGCGCGGCAACTGGCAAGACAAGGTCGAAGGGCTGG CAGCGGGCGCTGACGACTATGTGGTCAAGCCGTTCCAGTTCGAAGAACTTGAAGCGCGTTTGAATGCCTTGTTGCGCCGCTCCAGCGGTTTTACCCAGCC CACCATCGTGGCTGGCGAACTGGTGCTCGACATCAATCGCAAGCAAGCGGTGCTGGAGGGTGAGCCGCTGGCGCTGACGGCCTATGAATACCGGATTCTG GAATACCTGATGCGTCATCACCAGCAGGTGGTGGCCAAGGACCGACTGATGGAACAGCTGTACCCGGATGACGAGGAACGTGATCCGAATGTGATCGAGG TGCTGGTCGGGCGCTTGCGACGCAAGTTGGAGGGGGCAAACGGCTTTAAGCCAATCGATACGGTGCGCGGCATGGGGTATTTGTTTACTGAGCGCTGCCG
|
|
| DNA Sequence for Gene |
>AA040_RS05930
ATGATTCGTTCGCTGCGCGTTCGACTGATGCTTGCGGCCACCTTGCTGGCCGTGCTGTTCATGCTGGCGCTGTTACCGGCCATGCAAGGGGCATTCAGTC TGGCGCTCAAGGGCGCCATCGAGCAGCGTTTGGCATCGGATGTAAACACCCTGATTTCCGCGGCACGGGTCGAAAAGAATCACCTGAAAATGCCGGTCCT GTTGCCGGATGAGCAATTCAACCTGCCGGACAGTCGCCTGCTCGGCTACATCTATGACCGCGAGGGCCATCTGGTTTGGCGCTCGCGGGCCACGCAAGAA GAATCCATCAACTACAAGCCGCGCTATGACGGGCGCGGTAACGAGTTCGCAAGTATTCGTGAGGACAGCGGCGAAGAGTTCTTCGTCTATGACGTGGAGG TCAAGCTGCTGGGCGGCAAAAGCGCGGCCTTCAGCTTCGTGGCGTTGCAGCCCATGCGCGAATACAACATGACCCTCGCCGGGCTGCGTGAAAATCTTTA CCTGGGATTTGGCGCTGCATTGTGTGTGTTGCTGGCGCTGCTATGGATTGGATTGACGTGGGGGTTGCGTGCCTTGCGACGTTTAAGTCAGGAACTGGAC CAGATCGAAACCGGCGAGCGCGACAGCCTCAGCGAACAGCACCCGCGTGAATTGCTGCGCTTGACCGGCTCCTTGAACCGCTTGCTGCAAAGCGAGCGTG AACAGCGCACCCGCTACCGCGACTCGCTGGATGACCTGGCCCACAGTCTGAAAACCCCGCTGGCGGTGTTGCAGGGCGTCAGCGAAAGCATGGCCCAGCG TCCGGAAGACCGCGAGCAGGCGTGGGTACTGCAAACCCAGATCGAACGCATGAACCAGCAAATCAGCTACCAGTTGCAACGCGCCAGCCTGCGCAAAAGT GGCCTGGTGCGCCATCAGGTCGAGCTGATCCCGGTGGTTGAAAGCCTGTGCAACACCTTGGAAAAGGTCTATCGCGACAAGCGGGTCAAGGTCAGTTTGG ACATTGCGCCCCTCAGCCATGTGCCGATCGAGCAAAACGCGTTGCTGGAGCTGCTCGGCAACCTGCTCGAAAACGCCTACCGCCTGTGTTTGAGCCAGGT GCGCATCAGCCTGCATCGCACGGCGGCCGGGATTGACGTGTGCGTGGAAGACGACGGGCCCGGCGTGCCCGCCGATCAGCGGGCGCGCATTCTGCAACGT GGCGAACGTCTTGATCGCCAGCATCCGGGGCAGGGGATCGGCCTGGCGGTGGTCAAGGACATCATCGAAAGCTACGACGCGCAGCTGACCCTGGATGATT CCTCCCTGGGCGGCGCGGCATTCCGCATACGCTTCCCGCTGACGTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
AGCAGGCGGAAATCCGCCATTTCCTCCTGTCGTTCACAGTCAATGGGCGGAAACCCGCCAAAGTTGTCCTACAAAAATTGTCTGTAATTTCCTACAAGGC TAAGTGGCGTCGGGCTTTGGGCGTGTTTTGCCAACGTTGGCCCGTGGCTTGCAATAAGTGCGAGAGGTCTGCCGACAGAGCAGCTCGACACAACAAATCC CTCCAAGTACAGGAGGGTTCGCGCTTTAGGCGTTGCCGGTCTCAGATGGAATGATGGCCGAGTGATGCACTTGAGGAACTTTGCAATGACGACTCGTCAG CCACTGTACAAATCCCTGTATGTGCAAGTAATCGTAGCGATCACGATCGGCATTTTGCTGGGCCACTACTACCCGGAAACCGGTGTAGCGCTCAAACCCT TGGGTGATGGCTTTATCAAACTGATCAAGATGGTCATTGCCCCGATCATTTTCTGTACGGTGGTGAGCGGTATCGCCGGGATGCAGAGCATGAAATCGGT
|
|
| Amino Acid Sequence |
>histidine kinase
MIRSLRVRLMLAATLLAVLFMLALLPAMQGAFSLALKGAIEQRLASDVNTLISAARVEKNHLKMPVLLPDEQFNLPDSRLLGYIYDREGHLVWRSRATQE ESINYKPRYDGRGNEFASIREDSGEEFFVYDVEVKLLGGKSAAFSFVALQPMREYNMTLAGLRENLYLGFGAALCVLLALLWIGLTWGLRALRRLSQELD QIETGERDSLSEQHPRELLRLTGSLNRLLQSEREQRTRYRDSLDDLAHSLKTPLAVLQGVSESMAQRPEDREQAWVLQTQIERMNQQISYQLQRASLRKS GLVRHQVELIPVVESLCNTLEKVYRDKRVKVSLDIAPLSHVPIEQNALLELLGNLLENAYRLCLSQVRISLHRTAAGIDVCVEDDGPGVPADQRARILQR GERLDRQHPGQGIGLAVVKDIIESYDAQLTLDDSSLGGAAFRIRFPLT
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|