Strain | Pseudomonas fluorescens strain AU7350 Contig_55, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CTCAATGGCGAAGCGTTATTCAGCGGTCTTTATCTCAATGAATTGTTAGTGCGCTTGCTACCGGCTGAAGACCCGCACCCCGCGGTCTTTGATCACTACG CAGCCACCCTCCTGGCGTTGGCCGAAGGTCGACCGCTGGAACCTCTGCTACGGGCCTTCGAATGGCGCTTGCTGGATGATTTGGGGTACGGGTTTTCGCT TTCTCGGGACATTCAGGGTGAGCCGATAGCCAGTGACGGCATGTACCGTTTGCAGGTCGATGCCGGGCTGGAGCGCATTTATCTGGTACAGCCGGGGTTG TTTCACGGCGCTGAGCTACAGGCCATGGCCGAGGCTGACTGGACCACCGCGGGTGCGTTGTCGGCGGCCAAGCGTTTGATGCGCCAGGCATTGGCGGTTC ACTTGGCGGGCAAGCCCCTGGCCAGTCGTGAGTTGTTTCGCAAGCCCTGAATAGACCGGTATGCTGTGCGCCGAATCTTCAACTCTTCAGGAGAGCCCTC
|
|
DNA Sequence for Gene |
>AA040_RS17090
GTGACCCAAAGCAATCGCATCCTTCTCGGCGTGAATATCGACCACGTAGCCACGCTGCGTCAGGCTCGGGGCACGCGTTACCCTGATCCGGTCAAGGCCG CGCTGGACGCTGAAGAGGCGGGCGCCGATGGCATCACCGTGCACTTGCGTGAAGACCGCCGCCACATTCAAGAGCGCGACGTGTTGTTGCTCAAGGATGT GCTGCAAACCCGCATGAATTTCGAGATGGGCGTGACCGAAGAAATGATGGCGTTTGCCGAGCGCATTCGTCCGGCGCACATCTGTCTGGTGCCTGAAACC CGTCAGGAACTGACCACGGAGGGTGGGTTGGACGTGGCGGGGCAGGAAGCCCGGATTAAATCAGCGGTTGAGCGCTTGAGCCGGATTGGCTGTGAAGTGT CGCTGTTCATCGATGCCGATGAGCGTCAGATCGAGGCATCGAAGCGAGTCGGTGCGCCGGCGATTGAATTGCACACCGGTCGTTATGCCGATGCGCAAAC CCCCGCCGAGGTGGCGCAAGAACTGCAACGGGTAGCGCAAGGCGTGGCCTGTGGTCTGGCTCAAGGGCTGATCGTCAATGCCGGGCATGGCCTGCATTAC CACAACGTTGAGGCCGTGGCCGCCATCAAAGGCATCAATGAGCTGAACATCGGTCATGCGTTGGTGGCGCATGCCCTGTTCGTAGGCTTCAAGTCGGCCG TCTCGGAAATGAAAGCGTTGATTGTGGCAGCCGCCAGGCACTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
DNA Sequence Downstream of Gene |
GGGCATTTACGCTTTCAAGCGGCGCAAACTGCGCGGTGCGGGTGCGACAGGCACTTGATCGCCGGATAAGCCGCCTCGAACCGCAGCAGCAATGAAGAGC CGCCGCTACAGCTGGGGTTCTTCTTTGGGCTTGGTCTTGTCGATGCCGGGAATGTGCAGCTTGCTGTCAGCCGCCTGGTCGCCTTCAAGCTGCGGCTGCG TGGCCCATGTCAGGATGTCGTAGTAACGACGGATGTTGGCCACAAAGTGCACGGGCTCGCCGCCGCGGGCGTAGCCATAACGGGTTTTGCTGTACCACTG CTTCTGCGCAAGGCGGGGCAGCATCTTTTTGACGTCCAGCCACTTGTTCGGGTTCAGGCCTTCTTTCTTGGCCAGTTTGCGTGCGTCTTCCAGATGCCCG CCGCCGACGTTGTAGGCTGCCAGGGCAAACCAGGTACGATCTGGCTCCTGGATGTCGTCGTCCAGCTCGCTTTTGATCAGCGCCAGGTACTTAGCGCCGC
|
|
Amino Acid Sequence |
>pyridoxine 5'-phosphate synthase
MTQSNRILLGVNIDHVATLRQARGTRYPDPVKAALDAEEAGADGITVHLREDRRHIQERDVLLLKDVLQTRMNFEMGVTEEMMAFAERIRPAHICLVPET RQELTTEGGLDVAGQEARIKSAVERLSRIGCEVSLFIDADERQIEASKRVGAPAIELHTGRYADAQTPAEVAQELQRVAQGVACGLAQGLIVNAGHGLHY HNVEAVAAIKGINELNIGHALVAHALFVGFKSAVSEMKALIVAAARH
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|