Pseudomonas fluorescens AU7350, AA040_RS16795

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas fluorescens strain AU7350 Contig_50, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GGTCCGGCCTCAAAGAAAATGTTCGACAGTTTTGGGTCCTGACTGCCCAGCGTCATCATCAAACGGTGCAGGTTCAGGGAGGCCTGGCTGTTAATCAGGG TATGAAATCCCCGGCCGATGTTGAGCAGCACCTGCTCGACCGGCACACCCTCAGGCAATGAAAAAAACAGGTCCGGCAGTTGTTCGGAGCACGTGGCCTT GATCGCGGCCGAGAACAGGTTTTCCTTGTCGGTGAAATGGCTGTAGACCGTCAGTTTTGACACGCCGGCGTGGCTGGCGACCGCGTCCATGCTGGTGCTG GCAAATCCTTTGCTCAAAAAAAGACATTTGGCCGCCTCAAGGATCGCATGGCGTTTGGCCATGTCCTTGGGGCGTCCGGCGGCATTGGGCATTAAAGGAT GATCAGACATTTCCGTTTATTACTGGACTGGTGAGTTTGGTATTAATAACATGCCGGCCAGTATAAATATTCCAAGCCCCATAAGCGAAAGGTCGTCTCC
DNA Sequence for Gene
>AA040_RS16795
ATGTTGCGTCATGCCTTGCCCCGCGCTGTGCCTGTCTGTCTGGTGTTTTTGTTAGCTGCGTGCGGGCACGAGGAGCCTGTTCAGGTGAGCATCAGCCCCG CCATCGTGGTGCAACCTCAGCCTTCGGCAGTGGCCACCCAGAGTTATCCCGGCGAAGTCCGTGCCCGCTTTGACCCACAACTGGCCTTTCGTATTGGCGG CAAGGTCACTAAACGGTGGGTGGATGAAGGCGAACGGGTCAAGGCCAATCAGTCGCTGGCCGAACTGGACCCCCAAGACGTTCGCCTGCAACTGGAAGCC ACCCGCGCTCAGGTGGCGGCCGCGCAGGCCAACCTGAGCCTGGTGCGATCGGAGCGCGACCGCTACAAAACCCTCTTGGAGCGGCAGATGGTCAGCCGCT CGCAGTTCGATAACGCAGAAAACCTCTACCGTGCGGGCGAAGCCAAGCTGCAGCAGCTTAAGGCTGAACAGGATGTGGCCAGTAATCAGGCCAGCTACGC GGTGCTGCGCGCCCCGCAAGATGGCGTGATTGCCCAGCGCCAGGTGGAAGTCGGGCAAGTCGTGTCGGCCGGTCAGACCGTTTTCTCGTTGGCCGCCGAC GGAGAGCGTGACGTGTTGATCAGCCTGCCCGAACAGGCGTTCGGCCGTTTCAAGATCGGGCTGCCGGTGTCGGTTGAGCTGTGGTCACAACCCGGTCAGC GTTTCAGCGGGCGGATTCGCGAACTCTCACCTTCGGCTGACACCAAATCCCGGACCTTTGCCGCGCGCATCGCCTTCACGGCGGGCCAAGTGCCTGCTGA GTTGGGCCAGAGTGCGCGGGTGTTCATTGCGCAGGAGGGGGTGAATGCGTTGTCCGTGCCGCTGTCAGCCTTGAGTGCGGAAAACGGCGCGACGTACGTC TGGCGTGTGGGTCAGGGCAACAAGTTGCAGCAGGTGGCGGTGCGGGTTGGCCCGTATGGCCAGAGCAGTGTGCCGGTGCTGGAAGGGCTGACGCCCGCCG ATTGGGTGGTGGCGGCTGGCGTGCATGTTCTGCACGACGGGCAAGAGATCCGGCCGATTGATCGCTCCAACCGAACGATCAATACCGCGGCGAAGGAGTA A
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TACCCATGGGCTTTAACCTGTCTGCGTGGGCATTGCGCAATCGCCAGATCGTGCTGTTTTTAATGTTACTGCTGGCCATCGTTGGCGGGCTTTCCTACAC CAAATTAGGCCAGAGCGAAGATCCGCCGTTCACCTTCAAGGCCATGGTCATTCGTACGCTGTGGCCAGGCGCCACGGCAGAAGAAGTGTCACGTCAGGTC ACTGAGCGGATCGAAAAGAAGCTGATGGAAACCGGGGAGTACGAGCGCATCGTGTCGTTCTCGCGCCCCGGTGAGTCGCAAGTGACGTTCATGGCCCGGG ACTCCATGCACTCCAACCAAATCCCCGAGCTGTGGTATCAGGTCCGCAAAAAGATCAGCGACATTCATCACAGTTTGCCGCCGGGGATTCAGGGACCGTT TTTCAACGACGAATTCGGCACCACATTCGGCAATATCTACAGCTTGAGTGGCGAAGGGTACGACTACGCGGTGCTCAAGGACTACGCCGACCGCATCCAG
Amino Acid Sequence
>RND transporter
MLRHALPRAVPVCLVFLLAACGHEEPVQVSISPAIVVQPQPSAVATQSYPGEVRARFDPQLAFRIGGKVTKRWVDEGERVKANQSLAELDPQDVRLQLEA TRAQVAAAQANLSLVRSERDRYKTLLERQMVSRSQFDNAENLYRAGEAKLQQLKAEQDVASNQASYAVLRAPQDGVIAQRQVEVGQVVSAGQTVFSLAAD GERDVLISLPEQAFGRFKIGLPVSVELWSQPGQRFSGRIRELSPSADTKSRTFAARIAFTAGQVPAELGQSARVFIAQEGVNALSVPLSALSAENGATYV WRVGQGNKLQQVAVRVGPYGQSSVPVLEGLTPADWVVAAGVHVLHDGQEIRPIDRSNRTINTAAKE
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site