Pseudomonas fluorescens AU7350, AA040_RS20590
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas fluorescens strain AU7350 Contig_4, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CACCAACCTTAACCTTGAGGACATGGTGCGCGATGGCCGCTTCCGCGAGGACTTGCTCTATCGTCTGAACGTCATCACGTTGCACTTGCCGCCCTTGCGC GAGCGCAGCGAAGACATCCTGACGCTGGCCGACCGCTTTCTGGCGCGTTTCGTCAAAGAGTACGCACGCCCCGCCCGCGGCTTCAGCGAAGAAGCGCGTC AGGCACTGGCCAATTACCGATGGCCTGGCAATATCCGCGAACTGCGTAACGTTGTAGAACGCGCCAGCATCATTTGCCCGCAGGAAGTCGTTGAAGTCAG CCACTTGGGCATGGCCGAGCAAACCACGCCCAACGCCCCGCGTATCGGGGCTGCATTAAGCCTCGACCAGTTAGAGAAAGCGCACATCGGCGCGGTACTG GCCACCAGCGACACCCTCGATCAAGCTGCCAAAACCCTCGGTATTGACGCCTCAACGCTGTATCGCAAACGCAAGCAGTACAACCTGTGAGTAATCTTCG
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| DNA Sequence for Gene |
>AA040_RS20590
ATGAAACTCGCTATCAAGCTTCGAACACGCCTTTTTTTGAGCATTTCAGCGCTGATTACCGTGGCGCTGATGGGGTTGGTGCTCGGCGTGTTCGGCGTGA TGCAAATGGCCAAAACCCAGGAAGCGTTGATCCGCAATAACTTCATCACCCTCGATCTGGGGCTCAAGCTGCGCCAGACCTTGGGGGATCAACTGATCCT GATGCTGCACAACGAACCTGATACGGCTGAGCTTAAAGCCACCTCCGAGCAGTACCTGAAACTGCTCGACGAAGGCATCGAACACGAGCGCAAGCATAAT TTGACCAGTGGGTTTGCCAAGGCGCGGGTCGATTATGTGAGCTTTCTGGAGGCGTTCAATCAGACGCATCGCCAGGGTCTTAACCTGAGCAACAACAATG ACCTCACCAACCGCTTCAATGCGCTGCGCAACGGCCTGATTGACGAACACCGCAAGGCGCTCGAAACCATCAACACCGCACAGGCGCAGGCGCGTGAACG GGCCATGGTGATCGCCACGGTACTGGGGCTGGTGGGCGTTGCGGTGCTGATCATCGGCTTTATTACCGCCCACGGGATCGCCCGACGTTTTGGCGCGCCC ATCGAGGCGCTGGCCAAAGCGGCCGACAACATCGGTAAAGGGAATTTCGAGGTGGTTTTGCCGCTGTCTTCCGCCACCGAGATGAACCTGCTGACGCGGC GTTTCGGCATCATGGCCGAAGCCTTGCGCCAGCATCAGGCAACCAACGTCGATGAACTGTTGGCCGGGCAACAACGGCTACAGGCAGTGCTCGACAGCAT TGACGACGGGTTGTTGATGATCGATCAAGAGGGCCGTCTGGAACACCTGAACCCTGTCGCTCAGCGTCAGTTGGGCTGGGACGAAGGCCGTCTGGGCCAG ACGCTGGGCGAAGCCTTGCAGCGGCCGGAGCTGGATCAGCAACTGTTGACTGTATTACGCGGCGGCAGTCTGGAACGCTTGCCGGAAGACCTGAGCGTCG ACATTGAGGGTGAAACACGCCTGCTGACGTACAGCCTGACCCCGGTCAGCCAACCCAAGGGCCCGATTCTGGGCGCGGTAATGGTGCTGCATGATGTGAC CGAGCAGCGGGCGTTCGAGCGGGTTCGCAGCGAGTTTGTATTGCGGGCCTCTCACGAGCTACGGACCCCGGTGAGCGGCATGCACATGGCGTTCGGTTTG TTTCTGGAGCGTGCGCATTTCGATCCGCAATCACGTGAAGCGGACTTGCTGAACACGGTCAACGAAGAAATGCAGCGGCTGATGCAGCTTATAAACGATC TGCTGAACTTCTCCCGCTATCAGAACGGCATGCAAAAACTCACCTTGGCACCGTGCGACCTTCAGGAAATGCTGGAGCAGGCGCAAGCCCGATTTGCTGA CCGGGCCAACGCCAAGGATGTCGAGTTTGTGATCGACCTGCAGTCGCCACTACCGCGCCTCAATGCCGATCAGGCGCAATTGGAACGCGTGCTGGACAAC CTGATAGACAACGCCTTGCGCCATACCCCTATTGGCGGGCAAATCCGCCTGCAAGCGCGGCGCCATGGAGAGCGGGTGATTATCAGCGTCGAAGACAATG GCGAAGGCATCGCCTACAGCCAGCAAGGCCGTATTTTCGAGCCCTTCGTGCAAGTCGGCCGTAAAAAAGGCGGCGCAGGGTTGGGGCTGGCGTTGTGCAA GGAGATTGTGCAGTTGCACGGCGGGCGCATCGGCGTCTACTCGCGTCCTGGCCAAGGCACCCAGTTCTATATGGCGCTGCCGTTATAG
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GCGCGGCTTACACGTCGTCGTCAGCACGACGTGGGCCGAGCCGTCGGCCACCGGTGATGCGCTCCCGGAACTGGTGCGCATTCAGCGGTTTCTCAAACAG CCAGCCTTGCCCATAGACCACGCCCTCGCTGCGCAACAATTCAACCTGATAGTCATGCTCGATGCCTTCAGCGATCACCTTGAGGTTCAAGGCGTGAGCC ATGCGGATGATGTGTGGCGCCACGCCGCTGCTGGCCGCGTCATAGCCCAGCGCATCAATGAATGCCTTGTCGATTTTCAGGCAGTCCACGGGCAAGGTTT GCAGGTACGCCAGGCTGCTGTAGCCGGTGCCAAAGTCATCAATCAGGATTGAATGCCCCTTGTCGCGCAAGGCTTGAAGCTTGAGGCGCGCGACTTCGAC ATCGATCATGCCGCGCTCGGTGACTTCAAACGCGATCTGGCTGGCCGCCACCTCGTGAATGGCCAACAGACGCGCCACCACCTTGCCAATGCGCGGCTCC
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| Amino Acid Sequence |
>histidine kinase
MKLAIKLRTRLFLSISALITVALMGLVLGVFGVMQMAKTQEALIRNNFITLDLGLKLRQTLGDQLILMLHNEPDTAELKATSEQYLKLLDEGIEHERKHN LTSGFAKARVDYVSFLEAFNQTHRQGLNLSNNNDLTNRFNALRNGLIDEHRKALETINTAQAQARERAMVIATVLGLVGVAVLIIGFITAHGIARRFGAP IEALAKAADNIGKGNFEVVLPLSSATEMNLLTRRFGIMAEALRQHQATNVDELLAGQQRLQAVLDSIDDGLLMIDQEGRLEHLNPVAQRQLGWDEGRLGQ TLGEALQRPELDQQLLTVLRGGSLERLPEDLSVDIEGETRLLTYSLTPVSQPKGPILGAVMVLHDVTEQRAFERVRSEFVLRASHELRTPVSGMHMAFGL FLERAHFDPQSREADLLNTVNEEMQRLMQLINDLLNFSRYQNGMQKLTLAPCDLQEMLEQAQARFADRANAKDVEFVIDLQSPLPRLNADQAQLERVLDN LIDNALRHTPIGGQIRLQARRHGERVIISVEDNGEGIAYSQQGRIFEPFVQVGRKKGGAGLGLALCKEIVQLHGGRIGVYSRPGQGTQFYMALPL
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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