Pseudomonas fluorescens AU7350, AA040_RS19810

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0016772 transferase activity, transferring phosphorus-containing groups
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00344
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0005737 cytoplasm
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM01231
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0000155 phosphorelay sensor kinase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM01231
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006935 chemotaxis
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM01231
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0007165 signal transduction
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF50341
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0000160 phosphorelay signal transduction system
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00073
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0004673 protein histidine kinase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM01231
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0016310 phosphorylation
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00344
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF01627 Hpt domain IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 767 863 6.9E-12
Pfam PF01627 Hpt domain IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 1073 1173 5.2E-15
SUPERFAMILY SSF52172 CheY-like IPR011006 CheY-like superfamily 1851 1969 5.27E-37
Gene3D G3DSA:1.20.120.160 HPT domain IPR036641 HPT domain superfamily 626 752 3.2E-27
Pfam PF01584 CheW-like domain IPR002545 CheW-like domain 1692 1824 1.1E-21
SUPERFAMILY SSF50341 CheW-like IPR036061 CheW-like domain superfamily 1687 1820 4.84E-24
PRINTS PR00344 Bacterial sensor protein C-terminal signature IPR004358 Signal transduction histidine kinase-related protein, C-terminal 1671 1684 1.2E-9
PANTHER PTHR43395 SENSOR HISTIDINE KINASE CHEA - - 628 749 0.0
Pfam PF01627 Hpt domain IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 628 713 1.1E-12
SUPERFAMILY SSF55874 ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase IPR036890 Histidine kinase/HSP90-like ATPase superfamily 1503 1684 5.63E-35
Gene3D G3DSA:1.20.120.160 HPT domain IPR036641 HPT domain superfamily 14 127 6.0E-8
Gene3D G3DSA:1.20.120.160 HPT domain IPR036641 HPT domain superfamily 1212 1342 1.2E-31
SMART SM00073 hpt_2 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 1212 1309 3.1E-8
PRINTS PR00344 Bacterial sensor protein C-terminal signature IPR004358 Signal transduction histidine kinase-related protein, C-terminal 1591 1605 1.2E-9
SMART SM00448 REC_2 IPR001789 Signal transduction response regulator, receiver domain 1852 1965 9.2E-37
Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IPR003594 Histidine kinase/HSP90-like ATPase 1550 1685 3.6E-13
Gene3D G3DSA:2.30.30.40 SH3 Domains - - 1760 1821 7.9E-20
CDD cd17546 REC_hyHK_CKI1_RcsC-like - - 1854 1965 6.51999E-31
SUPERFAMILY SSF47226 Histidine-containing phosphotransfer domain, HPT domain IPR036641 HPT domain superfamily 764 883 3.14E-19
SUPERFAMILY SSF47226 Histidine-containing phosphotransfer domain, HPT domain IPR036641 HPT domain superfamily 1071 1193 2.22E-27
SMART SM00073 hpt_2 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 626 727 8.6E-4
FunFam G3DSA:3.30.565.10:FF:000016 Chemotaxis protein CheA, putative - - 1502 1686 8.0E-60
Pfam PF01627 Hpt domain IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 10 98 2.1E-7
PRINTS PR00344 Bacterial sensor protein C-terminal signature IPR004358 Signal transduction histidine kinase-related protein, C-terminal 1647 1665 1.2E-9
Gene3D G3DSA:1.20.120.160 HPT domain IPR036641 HPT domain superfamily 760 889 3.6E-18
SUPERFAMILY SSF47226 Histidine-containing phosphotransfer domain, HPT domain IPR036641 HPT domain superfamily 1212 1330 5.5E-27
CDD cd00088 HPT IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 765 834 1.57791E-7
Coils Coil Coil - - 1400 1420 -
Gene3D G3DSA:3.40.50.2300 - - - 1854 1973 2.7E-40
Pfam PF00072 Response regulator receiver domain IPR001789 Signal transduction response regulator, receiver domain 1854 1965 1.2E-27
MobiDBLite mobidb-lite consensus disorder prediction - - 1331 1361 -
SMART SM00073 hpt_2 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 1071 1168 1.6E-5
CDD cd00088 HPT IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 1074 1169 1.55685E-14
SUPERFAMILY SSF47226 Histidine-containing phosphotransfer domain, HPT domain IPR036641 HPT domain superfamily 6 129 4.58E-18
SMART SM00073 hpt_2 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 765 861 6.0E-4
CDD cd00088 HPT IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 1212 1310 6.14707E-14
SUPERFAMILY SSF47226 Histidine-containing phosphotransfer domain, HPT domain IPR036641 HPT domain superfamily 626 750 5.89E-26
SMART SM00387 HKATPase_4 IPR003594 Histidine kinase/HSP90-like ATPase 1546 1687 2.3E-23
SMART SM01231 H_kinase_dim_2 IPR004105 Histidine kinase CheA-like, homodimeric domain 1362 1501 1.7E-7
SUPERFAMILY SSF47226 Histidine-containing phosphotransfer domain, HPT domain IPR036641 HPT domain superfamily 431 542 8.83E-13
SUPERFAMILY SSF47226 Histidine-containing phosphotransfer domain, HPT domain IPR036641 HPT domain superfamily 906 1028 1.79E-12
SMART SM00260 chew_2 IPR002545 CheW-like domain 1679 1823 4.3E-24
Gene3D G3DSA:3.30.565.10 - IPR036890 Histidine kinase/HSP90-like ATPase superfamily 1500 1685 7.9E-50
Pfam PF01627 Hpt domain IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 1214 1314 4.5E-15
Gene3D G3DSA:1.20.120.160 HPT domain IPR036641 HPT domain superfamily 1071 1194 2.4E-27
Gene3D G3DSA:1.20.120.160 HPT domain IPR036641 HPT domain superfamily 903 1029 1.9E-10

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.