Pseudomonas fluorescens AU7350, AA040_RS13190

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas fluorescens strain AU7350 Contig_17, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
TGAAAACCGCGTTTCAAATCGGCTTCATGATCTTCATTCCGTTCCTGATCATCGACCTGGTAGTGGCCAGTGTGCTGATGGCCATGGGCATGATGATGCT GTCGCCGCTGATTATTTCGTTGCCGTTCAAAATCATGCTGTTCGTGCTGGTCGATGGCTGGGCGCTGATTATCGGCACGCTGGCCAGCAGTTTTGGCGGG GTGTGACGCCATGCCCGGGAGTAATGCGCAATGACCCCAGAAGTCGCGGTTGACCTGTTTCGCAGTGCGTTGTGGCTGACCACCATGATGGTGGCCGTGC TGGTGGTGCCCAGCCTGCTGGTGGGCCTGATGGTCGCCATGTTCCAGGCGGCCACCCAAATCAACGAACAGACCCTGAGCTTCCTCCCGCGTTTGCTGGT GATGCTCGTGACCCTGATCGTGGCCGGGCCGTGGCTGGTGCAGACGTTCATGGAATACATCCTGTCGTTGTACGGCAGCATTCCGCAGTTGATCGGCTAA
DNA Sequence for Gene
>AA040_RS13190
ATGTCGCTGCTGGCCCTGACGGACGCGCAGATCAGTACCTGGGTCGCCAGCTTTATGCTGCCGCTGTTCCGGGTCGGCGCGCTGTTGACCACCATGCCGA TCATCGGCACGACCCTGGTGCCCAAGCGCATCAAGCTGTTTTTGTCGATCGCCATTACCCTGGCCATTGTGCCCAGCCTGCCGCCGCTGCCCACCGTCAA CCCGCTGGACCTGAGCGGGTTGATGCTGATTGCCGAGCAAATCATCATCGGCGCGTTGCTCGGGTTTTCACTGCAGCTGTTTTTCCAGGCGTTCGTGGTG GCCGGGCAAATCGTCGCGATCCAGATGGGCATGGGCTTCGCCTCCATGGTCGACCCGGCCAACGGGGTTAACGTGGCGGTGATCGGGCAGTTTTTCACCA TGCTGGTGACCTTGCTGTTCCTGTCCATGAACGGGCACCTGGTGGTGTTCGAAGTGCTCACCGAAAGCTTTACCACTTTGCCGGTCGGTGGCGGTTTATT GACCCTTCATTTTTGGGAAGTGGTGGGCAAACTGGGCTGGGTGTTGGGCGCGGCCCTGATGCTGGTGCTGCCGGCCATTACCGCGCTGCTGGTGGTCAAC ATTGCCTTCGGCGTCATGACCCGGGCGGCGCCGCAACTGAACATCTTCGCCATCGGCTTTCCGCTGACCCTGGTGCTGGGCATGGTGATCCTGTGGATCA GCCTGGCGGACATCCTCAATCAGTACCAACCGCTGGCCACTGAGGCCCTGCAGTTCTTACGTGATCTGGCACAGGCGAAATAG
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CCATGGCCGAAAGCGAGAGTGGCGCCGATAAAACAGAAGACCCCACGGAGAAACGAAAAAAAGACTCCAGGGAAAAGGGCGAGATCGCACGCTCTAAAGA ACTGAATACGCTGGCCATCATGCTCGCCGGGTCCATCGGCCTGATCATCTTTGGCGGTGCGCTGGCGCAGGACATGATGGAAATCATGCGCTACAACTTC AGCATCAGCCGCGAAGCGCTGCTCAACCCCGATTCCATGGGCGCCTACTTGCTGCACTCGGGCAAAATCGCGCTGATCGCGCTCCAACCCGTGCTCATCA CCTTGCTGATTGCCGCCCTGATCGGGCCGATTGCACTGGGTGGCTGGCTGTTCGCGGCGGGCAGCCTGGCGCCCAAGTTCAGCCGCATGAACCCGGCGGC GGGGCTCAAGCGCATGTTCTCGGCCAAGGCGCTGGTCGAACTGCTCAAGGCGCTGGCCAAATTCTTCATCATCCTGATCGTGGCGTTGATGGTGCTCCAG
Amino Acid Sequence
>flagellar biosynthesis protein FliR
MSLLALTDAQISTWVASFMLPLFRVGALLTTMPIIGTTLVPKRIKLFLSIAITLAIVPSLPPLPTVNPLDLSGLMLIAEQIIIGALLGFSLQLFFQAFVV AGQIVAIQMGMGFASMVDPANGVNVAVIGQFFTMLVTLLFLSMNGHLVVFEVLTESFTTLPVGGGLLTLHFWEVVGKLGWVLGAALMLVLPAITALLVVN IAFGVMTRAAPQLNIFAIGFPLTLVLGMVILWISLADILNQYQPLATEALQFLRDLAQAK
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site