Pseudomonas fluorescens AU7350, AA040_RS13165

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas fluorescens strain AU7350 Contig_17, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GCCACCCCTTTGTTTGGCGACGAAAGGTGGCTTATGCATCTAACCATTGGACTTTCCTCATGCCGAACGCTCCCTACATCCCGCTGACTGCCATCGATTG CACCATCCCCGCCTTGCTGATTGACCGTAACGCCCCGCTGGACGTCTTGCACGCCAACGCCGCAGCCCGTGTGCTGGCGGTCACGCAACTGATGGAAACC TTTGCGAGCCGTGATCTGGAACACGCCGATCAGGTCGACCTCAAGCACCTGGCCACCACCGCCATGCTGTTGCTGCGCGATGGCTGCGATCTGCTCGATG TGCTGGGCTGGCGCCTCAGGCCCGCCTGACAGGGTGCCTCTGACCCCATCCCTCTCCTGACGGGAGAGGGTGTTTGCCCCTGAAGCCAAGGTTTTTTCAC TGGCAGGTGGCCATTTGCCAAAGTTGGAAGGCTTCTTGCAAAGGCAGGCTCCACGGCGCACATGGCGTCAAAAGTTTGCTAAAGGTTTCCCGCAATGTCA
DNA Sequence for Gene
>AA040_RS13165
TTGGATCGCTCTCAGTTAATCAACACCGCACGCAACGGTCTGACCGGTCTGGGTCAGGGGCAGTTGGGCGTGCCGTTGTTGTTGCTGGTGATGCTGGCCA TGATGATGTTGCCCATCCCGGCGTTCCTGCTGGACGTGTTCTTTACCTTCAACATTGCGCTGTCGATTGTGGTGCTGCTGGTGTGTGTGTACGCCTTGCG CCCACTGGATTTCGCCGTGTTCCCGACCATCCTGCTGGTGGCGACACTGATGCGCCTGGCGCTCAACGTGGCCTCGACGCGGGTGGTGATGCTCCACGGC CAAGAAGGTCACGGCGCGGCCGGTAAGGTGATCCAGGCGTTCGGCGAGGTGGTGATCGGCGGCAACTACGTGGTCGGTATCGTGGTGTTCGCGATTTTGA TGATCATCAACTTCGTGGTGGTGACCAAGGGCGCCGGGCGTATTTCCGAGGTGAGCGCGCGTTTCACCCTCGACGCCATGCCCGGTAAGCAAATGGCCAT CGACGCCGACCTGAACGCCGGGTTGATCGATCAGAACCAGGCCAAATCCCGCCGTCAGGAAGTCGCTCAGGAAGCCGAGTTCTACGGCTCGATGGACGGT GCCAGCAAGTTCGTGCGCGGTGACGCCATCGCCGGTCTGTTGATCCTGTTTATCAACCTGATCGGTGGCATGGCGGTGGGCATGTTCCAGCACGGCATGA CCTTCGCTGATGCCGGTAAAGTCTATGCGCTGCTGACCATCGGTGACGGTTTGGTGGCGCAGCTGCCTTCGCTGTTGCTGTCCACGGCCGCCGCGATCAT GGTGACCCGTGCGTCGGGCTCCGAAGAGATGGGCAAGCAGATCAGCCGCCAGATGTTCGCCTCGCCCAAAGCGCTGGCGGTGTCCGCCGGGTTGATGGCC GTGATGGGCGCCGTGCCCGGCATGCCGCACTTCGCGTTCCTGAGCCTGGCCGCCGTCTCCGGTGGCGTGGCGTATTTGATGTGGAAAAAACAAAACGCCG TCAAGGTTCAGGCCCTGCAGGAAGTTCAGCGCCAGCAGGAACTGCTGCCGTCGCCTGCCCGTGCGCAAGACACCAAAGAGCTGGGCTGGGATGACGTAAC CCCCATCGACATGATCGGCCTGGAAGTGGGCTACCGCTTGATCCCGCTGGTGGACCGCAACCAGGGTGGCCAATTGCTGGCGCGGATCAAGGGCGTGCGC AAGAAGCTGTCCCAGGATCTGGGCTTTCTGATGCCGACTGTGCATATCCGCGACAACCTCGACCTGGCGCCCAGCGCCTACCGCTTGACCCTGATGGGGG TGATTCTGGCCGAGGCCGAGATCTACCCCGACCGCGAACTGGCGATCAACCCCGGTCAGGTGTTCGGCACGTTGAACGGCATTACCGCCAAGGACCCGGC CTTTGGCCTCGAAGCGGTGTGGATCGAAGTCAGCCAGCGCAGTCAGGCGCAATCGCTGGGCTACACCGTGGTGGACGCCAGCACCGTGGTGGCCACGCAT TTGAACCAGATCCTCTACAAACACTCTCATGAGCTGATTGGTCATGAAGAAGTGCAGCAGTTGATGCAGTTGCTGGCCAAAGCCTCGCCTAAACTGGCTG AAGAGCTGGTGCCGGGTGTGCTGAGCCTGTCGCAGTTGCTCAAAGTGTTGCAGGCGCTGTTGGCCGAACAGGTGCCGGTGCGCGACATTCGCAGTATTGC CGAAGCCGTCGCGAACAATGCGCACAAGAGTCAAGATACCGCCGCTTTGGTGGCCGCCGTGCGGGTTGGTTTGTCCCGCGCCATCGTCCAAAGCATTGTA GGCGTTGAGTCTGAGCTGCCAGTTATCACGCTGGAGCCAAGGTTGGAACAAATATTGCTCAATAGTCTGCAGAAGGCAGGGCAAGGTCAGGAAGAGGGCG TTCTGCTGGAGCCGAGCATGGCTGAAAAACTGCAGCGTTCGTTGATCGACGCCGCACAACGCCAAGAGATGCAAGGCAATCCGGTGATCCTGCTGGTGGC CGGTCCGGTCCGCGCGATGCTGTCGCGGTTTGGCCGTTTGGCCGTGCCGAACCTGCATGTGCTGGCGTACCAGGAAATCCCTGACAACAAGCAAGTCACC ATCGTTGCGACAGTAGGCCCGAACGGCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GGTTTGGTTTATGCAAGTGAAGCGTTTTTTCGCCGCCGATATGCGTCAGGCCATGAAACTGGTTCGTGATGAGCTGGGGGCTGATGCCGCCATTATTGGT AACCGCCGCATTGCTGGCGGTGTTGAGTTGACCGCTGCGCTGGACTACAAGTTGTCCGCGCTGGCGCCCCGTGTGCCGAATGTCGAACTCGAAGAAGAGC TGCGCAAGACCCAGTCGCGCATTGTGTCGGCCCAGGCCGAGTTGAGCATGCGCGCTGAGGGCGAGTCGGATGTCAGTCGGCAATTGTTTGCCGGTTTGCC CCTGACCGCCGCCGAGCCACTGATCGAGCCGACGTTCGACGAGCCGCCACGTCCCGCAGCCCCGGCCGCGCCGAGCATGGACCAACGCGCCTTCGACACC ATGCGCTTTGAACTCAATGGCTTGCGCGAGTTGCTCGAAGTGCAGTTGGGTTCGTTGGCCTGGAATCAGTTGCAAGGCAGCAAACCGGCACAAGCCAATC
Amino Acid Sequence
>flagellar biosynthesis protein FlhA
MDRSQLINTARNGLTGLGQGQLGVPLLLLVMLAMMMLPIPAFLLDVFFTFNIALSIVVLLVCVYALRPLDFAVFPTILLVATLMRLALNVASTRVVMLHG QEGHGAAGKVIQAFGEVVIGGNYVVGIVVFAILMIINFVVVTKGAGRISEVSARFTLDAMPGKQMAIDADLNAGLIDQNQAKSRRQEVAQEAEFYGSMDG ASKFVRGDAIAGLLILFINLIGGMAVGMFQHGMTFADAGKVYALLTIGDGLVAQLPSLLLSTAAAIMVTRASGSEEMGKQISRQMFASPKALAVSAGLMA VMGAVPGMPHFAFLSLAAVSGGVAYLMWKKQNAVKVQALQEVQRQQELLPSPARAQDTKELGWDDVTPIDMIGLEVGYRLIPLVDRNQGGQLLARIKGVR KKLSQDLGFLMPTVHIRDNLDLAPSAYRLTLMGVILAEAEIYPDRELAINPGQVFGTLNGITAKDPAFGLEAVWIEVSQRSQAQSLGYTVVDASTVVATH LNQILYKHSHELIGHEEVQQLMQLLAKASPKLAEELVPGVLSLSQLLKVLQALLAEQVPVRDIRSIAEAVANNAHKSQDTAALVAAVRVGLSRAIVQSIV GVESELPVITLEPRLEQILLNSLQKAGQGQEEGVLLEPSMAEKLQRSLIDAAQRQEMQGNPVILLVAGPVRAMLSRFGRLAVPNLHVLAYQEIPDNKQVT IVATVGPNG
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site