Strain | Pseudomonas fluorescens strain AU7350 Contig_17, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CACCCTCCCTCGCGAGACGCTCGATAACATGAGCCCGGCACTCAACCTTTACGTGCTCGATGAAGACCTGCAAGCCCGTAACCTCCTGCCCCCGGAGTGG GCTACACGCGTCGACTACCCTGCATTTGTCGAACTGTCCCTTCACTATGACAAGGTCAACACCTGGCTATGACGGTCCTCACTCTCGACGGCAGATCCAT TGAGCTGGATAAGGACGGTTATCTGGCCGACCTGAATGACTGGTCGCCCGAGGTGGCCACGGCACTGGCGGTGCAAAATGACATCGAGCTGACCCCGGAA CACTGGGAGATTCTGCAGCTGCTGCGCAACTTCTATGAAGAGTTTCAGCTCTCGCCCGCCACGCGGCCCTTGATCAAATACACCGCGCTCAAACTGGGGG CAGAAAAAGGCAACAGCCTGCACCTCAATCGCCTGTTCAACGGCACCCCTGCCAAACTCGCCGCAAAACTGGCGGGCCTGCCCAAACCGACCAACTGCCT
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DNA Sequence for Gene |
>AA040_RS12755
ATGAACACCCCTGCTGCGCTGACGCTAACCACTCCCGCCGAACACCCTTTCGCTCAATTCGTACGCATTTTGGGCAAAGGTAAACGCGGCGCGCGCAACC TGACCCGTGAAGAAGCGCATGAAGCGATGGGCATGTTGCTCGACGAGAAAACTGAAGAGGCCCAGCTAGGCGCCTTCCTGATGCTGCTCAGGCACAAAGA GGAAAGCCCGCAAGAGCTGGCCGGTTTTGTGGACGCGGTCCGGGAACGACTGTCTGCGCCGACCATTCATGTCGATCTCGACTGGCCCACCTACGCGGGC AAAAAACGCCATCTGCCGTGGTACTTGCTTGCGGCAAAATGCTTGGCCCAGAACGGCGTGCGCATCTTGATGCATGGCGCAGGTGCTCATACGGCCGGGC GCCTTTACAGCGAGCAACTGCTCGACGAATTGAACATTGCGCTGTGCCGCGACTGGGCACAGGTCGAAAGCGCCTTGCAGCTGCACAATCTGGCCTTTTT CCCTTTACAGGACTGGGCACCTCAGCTGCAACACATGATCGATTTGCGCAACACGCTCGGCCTTCGCTCACCGATTCACTCATTGGCGCGCCTGCTTAAT CCGCTCCACGCCCGCTGTGGACTGCAAAGCATTTTCCATCCGGGTTATCAAAGCGTGCACCGCGAAGCCAGCACGCTGCTGGGTGACACCTGCATCGTGG TGAAAGGGGATGGCGGTGAGATCGAGATCAACCCCGACTCGATCAGCCACCTGTATGGCACGGCTAATGGCCTTAGTTGGGACGAAGAGTGGCCGGCGTT ATCGGCACAGCGGCACGTGAAACCCGCCTTTCTGGACACACTGCAACTCAAGGCCTTTTGGCGCGGGGACTTCGAAGACAGCTATGCGCAAAAGGCTCTG TTATCGACCATGGCCCTGGCTTTGCGCGGGCTGGGCACGCCCCGGGAACAGGCCTTCGTCATTGCCAAAACGTATTGGGAAAACCGCAACAAATCGATTT AA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
CCGATGGGTTACGCCCACGTTTTGCGCTATTCGTTCGAACTCAGACCTTTAGACTGAACTCCAAAGCGAAACCGCCAGGAGCTTCACATGGGCTTATTAA TTGATGGGCATTGGCATGACCAATGGTATGAAAGCAGCAAAGACGGTGCGTTCCAGCGAGAGCAGGCACAGCGCAGAAACTGGATCACGCCCGATGGCGC GCCCGGTCCAACCGGAATTGGCGGTTTCGCACCCGAGGCCGGTCGCTATCATTTATACGTTTCTCTGGCCTGCCCATGGGCCCATCGCACGCTAATAACC CGCACCCTCAAGGGCCTCGAACCCTTGATCGGCGTGTCCGTGGTGAGCTGGCTGATGCTGGAAAATGGCTGGACGTTTGATCGCGCTTACGGCTCCAGTG GCGACCACCTGAATAACGCTGACTTCCTGCATCAGCTGTATACACGCGACACGCCCGATTACACCGGCCGCGTCACCGTACCGGTACTTTGGGATACCCA
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Amino Acid Sequence |
>hypothetical protein
MNTPAALTLTTPAEHPFAQFVRILGKGKRGARNLTREEAHEAMGMLLDEKTEEAQLGAFLMLLRHKEESPQELAGFVDAVRERLSAPTIHVDLDWPTYAG KKRHLPWYLLAAKCLAQNGVRILMHGAGAHTAGRLYSEQLLDELNIALCRDWAQVESALQLHNLAFFPLQDWAPQLQHMIDLRNTLGLRSPIHSLARLLN PLHARCGLQSIFHPGYQSVHREASTLLGDTCIVVKGDGGEIEINPDSISHLYGTANGLSWDEEWPALSAQRHVKPAFLDTLQLKAFWRGDFEDSYAQKAL LSTMALALRGLGTPREQAFVIAKTYWENRNKSI
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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