Pseudomonas fluorescens AU7350, AA040_RS12260

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas fluorescens strain AU7350 Contig_17, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CCCGCACCGTCGAACGACAAGCGCCGCCATTTATCCCTTTTACAAAAGCCGTCGAGCAGCAACCTCTGTTCGACTTTGCACATGCTGCGGGCACGCTGGT CGGATTCCGCTCACCCGATTTCATTCAGGGCATCGGCGTGGCCGGTTACCACGAACACTTCATCACCGAGCAGCGCCACGGCGGCGGGCATGTCATTGAC TTCCATTTGCAGCACGGTTCAGTGCAGTTCGGCATCATCAGTCGGTTGGTGGTGCACTTCCCCACCGGCGAGGACTTCAAGCACGCCAATCTGACCCCGG CCTTTCTGGACCGGGATATCCGCCGGGTTGAGCAGTCATCGTGAGGCCGCCTGTGACCTTGAGGCTCGGGCTTTGAGGTCACTTCGAACGCGAATACATA TTCTTAAATAGAATATCTAAATCGTTTTATATTCTTTTTTAAAAGCTAAATTTCCTGCAAGACTCTCGTCATAACGATTCCAACTCATGATGAGAACGAA
DNA Sequence for Gene
>AA040_RS12260
ATGAAGAAAATCACTGCCCTCACCGCATTGACCCTGGCTGTTTTGTCAGGCTTGGCTCACGCCGATCGTCTGGACGACATCAAAAAATCCGGCGTGCTGC GCGTGGCGTCGTTCGACAGCAATCCGCCGTTCGGATTTGTGGATGCCAAGAGCAAGCAGATTGAAGGCCTGGACGTGGATTACGCCAAGGCCATCGCTGA CAAATTGGGCGTGAAATTGCAGCTTCAGCCAACCAACCCGGCCAACCGCGTACCGCTGCTGGTGGCCAACAAGGTGGATCTGGTGCTGGCCAACTTCACC ATCACCCCGGAGCGGGCCGAGCAGGTGAATTTCAGCATTCCGTATTTCTCGTCCGGTCAGCAATTCATCGTCAAAAAAGGCACCCTCACCTCCCCTGAAG AGTTGAACAAATGGCGCGTGGGGGTGGACAAGGGCACGGTCAATGAAGGCGTGCTGCGCAAGAAATTCCCGGGTGCCAAGGTTGTTGCCTATGACGACAC CCCCTTCGCATTCACCGCCCTGCGCAACGGCAACGTACAAGCCATCACTCAGGATGGGCCGAAACTGATCGGCTTGCTGGCTAATGTGCCGGACAAGGAC AAGTACGAAGTGCCGCCGTTCACCATTTCCAACGACTTGATCGGGGTGGGCATTCCCAAAGGTGAAACAGCGCTGACCGAAGTGGTCAACCAAACGCTGG TCGAGCTGGAAAGCAAAGGTCAGGCGCAAACCATCTACGACGCCTGGTTCGGCCCGAACACGAAAACCCCACTGACCCGTCTCTACAAGATCGGTGACAA GAGCTAG
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GCCCTCACTGCTGCATCATCGTTCAACCCGTCACGGTCAACCGGACGGGTTTGTTTGTTTCTGGATGGACGCTGTTTATGTTCGGTGAACTGCTTGCCCC GCACTACTTGCACTGGCTGCTGGATGGCTTTGTGCTCACGCTGATCCTGTCACTGCTCACTTGTGTCTTCGCCACTGGCCTCGGCTTTTTGCTGTGCCTG GCACGCTTGTCCTCTGCGCGTCTGTGGTCGTGGCCCGCCCGCGCCTATCTTTCACTGTTTCGCAACACGCCACTGCTGGTGCAATTGTTTTTCTGGTACT TCGGCGTCACCGCGATGCTGCCTGAAGGGTGGGTGATGTGGCTTAACCAGCCACGCAGCCTGTCGTTAGGCTTCTTTGAGCTGCAATGGCCATCCTTTGA ATTCATCGCCGGGTTCTGGGGATTGATGCTCTACACCGCGGCCTTTATTTGTGAAGAGTTTCGCGCCGGGGTCAGCTCGGTGCGCATTGAGCAACGAGCC
Amino Acid Sequence
>amino acid ABC transporter substrate-binding protein
MKKITALTALTLAVLSGLAHADRLDDIKKSGVLRVASFDSNPPFGFVDAKSKQIEGLDVDYAKAIADKLGVKLQLQPTNPANRVPLLVANKVDLVLANFT ITPERAEQVNFSIPYFSSGQQFIVKKGTLTSPEELNKWRVGVDKGTVNEGVLRKKFPGAKVVAYDDTPFAFTALRNGNVQAITQDGPKLIGLLANVPDKD KYEVPPFTISNDLIGVGIPKGETALTEVVNQTLVELESKGQAQTIYDAWFGPNTKTPLTRLYKIGDKS
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site