Pseudomonas fluorescens AU7350, AA040_RS02735
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas fluorescens strain AU7350 Contig_14, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CCCGCCCGAGCAAGAAACACCGCAATGGCACGTCAACTTGAGCTACTTGCAAGACCTGCGTCGCGCGGTCAGCCAGGCTCAGGGGTTGAGCCCCTATGCG CGGCCTGTCGGGCCGGGCACCCGTGTCTACAAACCGCTGGGCCTGCATGTACTGGTGGTCGAAGACAACGCCATCAGCCAGTTGATTCTCAAGGATCAGC TTGAAGAGCTGGGCTGCACGGTGGATCTGGCCTCGGACGGGCTGGAGGCGCTGGCGCTGTGGCAACAGTCGACCTTTGACCGGGTGCTGACCGACGTCAA CATGCCCCGCATGAACGGCTATGAACTGGCCACGCAATTGCGCCAACGCGATAGCAGCGTGCCGATCATCGGCGCGACCGCCAACGCTCAGCACGAAGAG CGCGAGCGCTGCCTGGCGGTGGGCATGAATGAATGCCTGGTCAAACCCTTTGGCCTCAGTGCCCTATTTACCTGCCTTGAGCAAACCGGGAGAAAGTCTC
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| DNA Sequence for Gene |
>AA040_RS02735
ATGCCGTATAGCGTTCTGATTGTGGAGGACCATCCTTTCCAGCATGAATACTTGCTCAACTTGTTCCGCGACCTGGGCAACATTCGTGTCGAAGCCGCCC GCGACGGCAATGAAGCGTTTGAGTGGCTGCAAAAACAACCGTTTGATCTGGTGCTCACCGACTTGCTGATGCCGGGCATGGACGGCGTGCAATTGATTCA GCGGCTGGCGTCTTTGCCACACAAACCTGCCCTGGCGATCATGAGCGCGGCTTCGCGGCGGATGATTGTCAGCGCCAGTCTGGTGGCGCAAAGCATGGGG TTGAGCGTGGTGGGGCAGTTGTCCAAGCCGGTCGTGCCGCTGGCGGTGCGTACGTTGATGACCACGCTGGATAAATTGATCACCACCGATCAACCCGTCG CCCGCGAGCCACTGGTGCTGGAGCGCGAAACCCTGCGTGAGGCCATGCGCAGCGGGGCGTTACAGGCGTGGTTCCAGCCGAAAAAATCCCTGCACGACGG GCATATCGTGGCCGCCGAGGCGCTGGCGCGTTGGGTCCATCCTGAACTGGGGTTGCTGATGCCGGCTGATTTCCTGCCCTCGCTGGTGAGCCTGGGCCTG GAAAAAGAGCTGTTGCTGCTGTTCATCAAGCAAACGATTGCTGCCCAGGCGAGCTGGACCAGTCAGGGGTACGACATCCCGGTGTCGATCAATTTGCCCA CCCATTTGCTCGACGACGATGACCTGGCGGATGCGCTTCATGATTACGTGCGCGCGCAAGGCGGGATCCCGGCGAAACTCGCTTTTGAGCTGATGGAGTG CTCGACCACGCAGGACATCAGCAAGTATTACGCGGGCGCCTGCCGGTTGCGCATGAAAGGGTTCGGGCTGGCACAGGACGACTTTGGCCAGGGATTCAGC TCGTACTTCAACTTGGTGTCCACGCCGTTCACCGAGTTGAAAATCGACCGGGCGCTGGTACACGGGTGTGTGGAAAACGAGAACCTAGCGTCGGCGCTGG CCAGTATCGTTGCGCTGGGGCGGCAATTGGGGCTCGAAGTGGTGGCCGAAGGGGTTGAAAGTCAGGAAGAGCTGGCCTTGTTACGCAAGCTCAACTGTGA CCGGGTGCAGGGTTTTCTCATCTCGCGTGCCGTATCATCGGGCCACTTCGGCCACCTGCTGCACGAAGACGCACCGCCGCGACTGCACTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CCTCACCCTCGGCATCCCGTTGTTTCTAAAAGGTGAAGACCGCACGCATCGGCCGGCTTGCGCTCGACTAAGCTTCGAGCCAGCGCCGGTCAGACCCTCA CGTAAATTACAGGACGTACCATGACCACCGACAGCACCTCACTGGGCAAACTCGCATTGAGCTCCATGCGCTTGAACCGTGGCGTCCTGATTTTGGTCGG GGTGGCGGTCGTGCTGGTCGGCACCTGTGCGTGGGCGTTGCAGCGTTTGCTGGACGTGGAAGTGAACAAGGTCGATTACCATTTTTCACGGCTGGTCGAG AGCCTGAATGAAAACCGTCTGTTTTTAAGCAACGTCAACAGTGCGGTGAATGACGCCCAGGATGTACTGACCAAGAACATCACCCCGCTGCAAAGCACGT TGGTGTTTCATGGGGCCGGGGTGAACATTTACGAAGGCAAAGAGTTTTCGTTTTCGACCCCCTTCAACCTGGCACAAAGCGACGCGAGCGAGACGGTTAG
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| Amino Acid Sequence |
>diguanylate phosphodiesterase
MPYSVLIVEDHPFQHEYLLNLFRDLGNIRVEAARDGNEAFEWLQKQPFDLVLTDLLMPGMDGVQLIQRLASLPHKPALAIMSAASRRMIVSASLVAQSMG LSVVGQLSKPVVPLAVRTLMTTLDKLITTDQPVAREPLVLERETLREAMRSGALQAWFQPKKSLHDGHIVAAEALARWVHPELGLLMPADFLPSLVSLGL EKELLLLFIKQTIAAQASWTSQGYDIPVSINLPTHLLDDDDLADALHDYVRAQGGIPAKLAFELMECSTTQDISKYYAGACRLRMKGFGLAQDDFGQGFS SYFNLVSTPFTELKIDRALVHGCVENENLASALASIVALGRQLGLEVVAEGVESQEELALLRKLNCDRVQGFLISRAVSSGHFGHLLHEDAPPRLH
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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