Pseudomonas fluorescens AU7350, AA040_RS11235

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
NCBIfam	TIGR01643	JCVI: YD repeat (two copies)	IPR006530	YD repeat	804	834	1.0E-4
NCBIfam	TIGR01643	JCVI: YD repeat (two copies)	IPR006530	YD repeat	823	862	0.0014
NCBIfam	TIGR01643	JCVI: YD repeat (two copies)	IPR006530	YD repeat	760	801	4.8E-9
Pfam	PF03527	RHS protein	IPR001826	RHS protein	1334	1369	4.7E-17
Pfam	PF05593	RHS Repeat	IPR031325	RHS repeat	718	754	5.1E-8
PRINTS	PR00394	RHS protein signature	IPR001826	RHS protein	1327	1347	1.9E-5
NCBIfam	TIGR01643	JCVI: YD repeat (two copies)	IPR006530	YD repeat	911	947	9.2E-4
NCBIfam	TIGR03696	JCVI: RHS repeat-associated core domain	IPR022385	Rhs repeat-associated core	1360	1441	2.4E-28
NCBIfam	TIGR01643	JCVI: YD repeat (two copies)	IPR006530	YD repeat	656	695	9.7E-6
NCBIfam	TIGR01643	JCVI: YD repeat (two copies)	IPR006530	YD repeat	718	756	8.6E-8
PANTHER	PTHR32305	-	-	-	530	1441	2.0E-41
Gene3D	G3DSA:2.180.10.10	-	-	-	418	744	1.3E-24
PRINTS	PR00394	RHS protein signature	IPR001826	RHS protein	1409	1428	1.9E-5
Gene3D	G3DSA:2.180.10.10	-	-	-	803	965	6.4E-26
CDD	cd20743	FIX_RhsA-like	-	-	28	116	5.12646E-32
Gene3D	G3DSA:2.180.10.10	-	-	-	966	1441	2.5E-79
Pfam	PF20148	Domain of unknown function (DUF6531)	IPR045351	Domain of unknown function DUF6531	357	428	1.1E-15
SUPERFAMILY	SSF69304	Tricorn protease N-terminal domain	-	-	693	971	2.09E-8

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.