Strain | Pseudomonas fluorescens strain AU7350 Contig_11, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CAAGCGTACCGGTCCGGACCTGGCCCGCGTCGGCGGCCGTTACTCCGATGACTGGCAGCGTGCGCACTTGTACAACCCGCGCAACGTGGTGCCTGAATCG GTCATGCCCGCGTATCCGTTCCTCGTGGAACGCAAGCTGGACGGCAAGGACACCGCGAAAAAAATGGAAGTCTTGCGCACGCTCGGCGTCCCTTACACCG ACGAAGACATCGCCGGTGCCAAGGATGCAGTGAAGGGCAAAACCGAAATGGACGCACTGGTGGCTTACCTCCAGGGCTTGGGCACTATCATCAAAAGCAA ACGGTGATCTAGATGGATATCGGGATGATTCGTGGCCTGGGCACTGTCGTCGTGATGGTGGCTTTTATCGGTTTGGCGCTGTGGGTATTCAGCCCGCGGC GCAAGTCGGAGTTTGAAGACGCAACCCTGTTGCCGTTCAAGGATGATCCCGAAGCCATCAAGCACGTCGAGCAAGAGCAAGCTTCTAGGAGTAACAAAGA
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DNA Sequence for Gene |
>AA040_RS09740
ATGACTACGTTCTGGAGTCTGTACGTTACAGTCCTCACTCTGGGTACCATCTTCGCCTTGACCTGGTTGTTGCTGGCCACCCGCAAGGGGCAACGCAGCG AACAGACTGACGAGACAGTTGGGCACTCTTACGACGGGATTGAAGAGTACGACAACCCGATGCCGAAATGGTGGTTCATGCTGTTTGTGGGCACCGTGAT TTTTGCCTTGGGCTACCTGGTGTTGTACCCGGGCCTGGGTAACTGGAAAGGCCTGCTGCCGGGCTACCAGTACCTCGACCTACAAAAGGAAACGCCGTTT GCCAATGGCCAGACGGGCTGGACCGGGGTTCACGAATGGGAAAAGGAAATGGCCAAGTCGGACGCCAAGTTTGGTCCGATCTTCGCCAAATTCGCTGCCA TGCCCATTGAAGAAGTCGCTAAAGATCCGCAAGCACTGAAAATGGGCGGCCGTTTGTTTGCGTCCAACTGCTCGGTGTGCCACGGCTCCGACGCCAAGGG CGCGTACGGCTTCCCTAACCTGACCGACGCCGACTGGCGCTGGGGTGGTAGCCCGCAAGAGATCAAGGCCACCATCATGGACGGCCGCCACGCGATGATG CCGGCTTGGGCAGACGTGATCGGCGAGCAGGGCGTAAGCGACGTAGCCGCTTACGTGCTGACCCAACTGGACGGACGCAAGCTGCCAGAAGGCGCCAAGG CTGATCCGGCCAAAGGCAAAGAGCTGTACGCCACCAACTGCGCCGTGTGTCACGGCCCAGAAGGTAAAGGCAACCCGCTGATGGGCGCACCCAACCTGAC TCACCCGGGCGCGTTCATTTACGGTTCGAGCTTCGCTCAACTGCAGCAGACCATCCGTTACGGCCGTCAGGGTCAGATGCCTGCTCAAGCGGATCTGCAA GGGAACGACAAGGTTCACTTGCTGGCCGCTTACGTGTACAGCCTGTCCCACGGTGAAGACGCCAAGGCCGCTGAATAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
CCCAGTGGTTTGACCGCGTTGACAAAGAGCCCCGCCACCCTGTGTTGGCGGGGCTTTTTTACGTCCTCAGAAACGGCACGTCACCCAACGAAACCGCTCT GGCCAAGCACGCTGCGGGGTTTTCCGGCCTGTAGGCAGGCACTGAAGTCAATTGATCTGTGTCATGACTTGTTACAACTGCTATACCAAGTTCTGTTTTT TCGGAACGCGACCAAAGGTCGCACCCTTGAGCTAGAGTCACAGGCGTATCATTGCGCCACTGCAACACCTTCTGACTGCGGCCGGCACGCACTGGTCGCG GCATTTTTCCACTGCCGTGGGACGCACTAATGAGCAATCAGATTCCAGTACACGATGTAACGCCACCTGCCAAGAAGGCACCTGAAAGCGTCAACCTCTA TGCTGCCCGGGAAAAAATCTACACCCGCGCATTCACCGGTTTGTTCCGCAATTTACGAATGGTCGGGGGGGCTGTGCTGTTTTTGCTGTACTTCGGCACT
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Amino Acid Sequence |
>cytochrome Cbb3
MTTFWSLYVTVLTLGTIFALTWLLLATRKGQRSEQTDETVGHSYDGIEEYDNPMPKWWFMLFVGTVIFALGYLVLYPGLGNWKGLLPGYQYLDLQKETPF ANGQTGWTGVHEWEKEMAKSDAKFGPIFAKFAAMPIEEVAKDPQALKMGGRLFASNCSVCHGSDAKGAYGFPNLTDADWRWGGSPQEIKATIMDGRHAMM PAWADVIGEQGVSDVAAYVLTQLDGRKLPEGAKADPAKGKELYATNCAVCHGPEGKGNPLMGAPNLTHPGAFIYGSSFAQLQQTIRYGRQGQMPAQADLQ GNDKVHLLAAYVYSLSHGEDAKAAE
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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