Pseudomonas fluorescens AU10414, AA048_RS09190

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas fluorescens strain AU10414 Contig_45, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
AAACGTCCGCGGATGGAAACCGGTTATCAGCACAGTGACCAGGGCGGGAGCTTTCGCAGGCTGATGGACGCGATCCGCCAGGTGTTGTCGATGGTGCTTG AACAACACGCCATCGAGCTGATCCTGCAAGCGCGCCAGTACGGCATCCTGGTGTCGCCGCTGCACGACCACAAATTGCTGACCTCGGCCTCGTTTGTACT GGCGGCCAGCGCCCATTGCGACAACGAAGAGTTGCGCCATCGCTTACCGGCGCACTTGAAAGTAGGCCCCGTGGAGCAGATCCGCCAATTGGTGAACCTG CACTTGCCCGGCATCAAGGTCAAACCGTTACCGGTGGCGCCTCGCCAGATTGCCTTTCACGCCAACAAAACCTATTTCATCCTCGAACTCAGTCCTGATG ACGTGGCACAGCTGGAGCGTTCCGGAGGCTTTGCATTCCACGTTTCCGGGGAGTTCTCCGAGCTTGAACTGAAATTCTGGGCCATCAGGAACTGACCGAC
DNA Sequence for Gene
>AA048_RS09190
ATGATCAAGGACATGGAACACAGCCAGGACGAGAAAACCGTCCTGCTTGACCGCAAGGGCAAAGGCCCGGTTGCGGGGCCGCTGACTGACTTTTCTTCGC CGCCGCGTTTTGAGCAACTGGAACAGCGCATGATTTACGCCGCGCGCATGCGCCCGGCGCAGACCTTCAGCATCAGCCTCAATTCGCTGGTGGCAGCGGC CTCTGAAGTATTGAGTGAAGTGGTGCGGCTCAAACACGCCAAAACCCGTGAGGACCTGACGCCATTGAACAGGCGCCTGACCAATGCCGTGCGGGAGTTT GAAGTGCGCGCCGCGCACAACGGCGCAGAAAGCAGCGAGGTCATGACGGCCCGTTACGTGCTGTGCACGGTGGTTGACGAAGCGGTGGTCACCACCGTGT GGGGCAGCGAAAGCGAATGGTCGAAGATCAGCCTGTTGAGCAGCTTTCACAGCGAAACCTTTGGCGGCGAAAAAGTCTTCAGCTTGCTTGAGCAGCTGTC CAAAAACCCGGTCAGGCACTTGCCGATGCTGGAGTTGTTGTACCTCTGCCTGGCGCTGGGTTTTGAAGGGAAATACCGGGTGCAACCGCGCGGCATGCTG GAACTCGAAGGCATCCGTGATGCGCTGTATCGCCAGATCCGCCAATTGCGCGGCGACGTGCCTCGCGAACTGTCGCCGCAGTGGCAGGGCTTGAGCCAAC AGCGCCGTCACCTGGTGCGCATCGTGCCCGCCTGGATGGTGGTGCTGTTTACCCTGGTGTGCCTGGGGGTGATGTATTCCGGGTTTGCCTGGGTGTTGGG CGAGCAACGCCAGACAGTTCTGCAACCTTACCAGCAGCTTGATCCGGCCCCGGTTCAGCCCAAGCCGCAGCCGTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
ACAAGGACGTGTGATGAAAAATTTTGTCAAAAATATCGGCGCATTCTTGTGCAAGACCTGGGTCTGGACCCTGCTCCTGCTGCTGTTCGCCGCGCTGTTG GTGTGGTTTGTCGGGCCGCTGTTGGCCGTCAACGATTACAAGTTCTGGGAAAGCCCGATTTCGCGTTTGCTGACCATCAGCGGGCTGATCCTGATGTGGG GCCTGTTCATGGTCTATGCCAACTGGCGGGCCGGGGTGCGCAAGCAGGCCTTAGAGGACAGTACCGACGGTCAGGAACGGCTGCGTCAGACCGAGAAGGC CGAGCAAGAGCGCAAGGCGCTCAGAGAGCGCTTCAAGGACGCCCTCAACACGCTCAAAACCTCCAGCGTCTATCGCGGGCGCAGCGAACGTTGGCGCAAT GATTTACCGTGGTACTTGCTGATCGGCCCCCAGGGCAGCGGTAAAACCAGTTTGCTGGCGTACTCGGGGCTGGAATTTCCGATCAACACGCTGGAGCGCA
Amino Acid Sequence
>membrane protein
MIKDMEHSQDEKTVLLDRKGKGPVAGPLTDFSSPPRFEQLEQRMIYAARMRPAQTFSISLNSLVAAASEVLSEVVRLKHAKTREDLTPLNRRLTNAVREF EVRAAHNGAESSEVMTARYVLCTVVDEAVVTTVWGSESEWSKISLLSSFHSETFGGEKVFSLLEQLSKNPVRHLPMLELLYLCLALGFEGKYRVQPRGML ELEGIRDALYRQIRQLRGDVPRELSPQWQGLSQQRRHLVRIVPAWMVVLFTLVCLGVMYSGFAWVLGEQRQTVLQPYQQLDPAPVQPKPQP
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site