Strain | Pseudomonas fluorescens strain AU10414 Contig_45, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CTGCGCAGTGTGGATGGTCACAGCGTGCCGATTTCGAAGGCCTATCTGGACCAAATGGGCTCGGCACAGGTGATTCGCCAGAGTTTCTTCGCTGAGAACC CGGCCGAGCCGCGTGTGCAGTTCAAGCTGGAGCCTTACACGCTGGACGCCGCCGTCAGCCGCTCGGCGTTTACCTTTGGCGACAAGGTGATTGAATACCG CCACGGCCCGATTGTGCCGGTGGCCTTCACATGGCCCACCGATACAGCCGCCGGCAGGACCAGCCTGGTGCTGGACAAAATGGTCGGGCGCCCGGTGGGC ATCGAAAAAAATACCGGAGCGTGGTCGCTGTTCCGCCTGTTTGACTTGATGCAAACCGAGTCACTGAGCGGGCGTGACGTGTTGGTGCTCAAAGCTGATC TCGGCGGGTTGCGGGCCAACTACCTGTTGACCACTGCGCGTGCGCCGAACCCGTTCGACATGGGGGTTATCCGCACCTTCCGTATGCCGGTGCAGCTCTG
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DNA Sequence for Gene |
>AA048_RS09180
ATGCGCCCGACCGGGCTCTGGCACAGCGCTGCGCGCACTGACCCCGGCAAGGTACGGGCGCGCAACGAGGATGCGTTTCTGGAGTGTCCGCAACACGGCT TATGGGTAGTGGCCGATGGCATGGGCGGGCATCAGGGCGGCGATATCGCCAGCCAGTTGATCGTTGCCAGCCTGGCGGATTTGCCGGTGGAGGTGGATTT CGACGCACGTCTGAAAAACGTTCGTCAGTGCCTGCACTGGCTCAACCGTCGACTGGGCCAGGAACTGACCGTGACCGCCGGGCGTTCCGACAGCATCATG GGCAGCACGGTGGTGGCGGTGTTGATGGAGGGCAACCGCGCCGCGTGTGTCTGGGCGGGGGACAGTCGGTGCTACTTATGGCGAGGCCAACGCTTGTACC AGCTGTCGAGGGACCATTCCCTGCAGCAGCAATTGATTGACGAGCAGCAAATGAGTGCCGAGCAGGCCAAGGCGCATCCCTCAGCCCATGCACTGACCCG TGCAGTGGGCGCCAGTGAGCAGTTGACGCTGGATGTCCTGGAGCTGGAAACCTGTCCGGATGATGCCTTTTTGTTGTGCAGCGACGGTTTGTATCAAAGT TTGAGCACCGATGCCCTTGGCCACGCGCTGAATCTGCCCGCGCCGCAGTTGGCGCTGGAGCGTTTGTTTGCCGGGGCGCTGCGCGGCGAGGCGCGGGACA ACCTGACCGCCGTGGTGATTCGCCAATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
TCGAGCCCGATGCCTCAACCGATGATCTGCTGGAAATGGCCGAGCAGGCCCCTAACCTGACGTACTTCGCCTTTGCCAAGAATGCGGTGCGCCAACCCGC ACCGGCCCCCACGCAGGCCAGTGTCGGGCAACTGCCGCAGGTGCTTGCCGGTCGCTATCAACTCGAAGGCTTGCTGGGCGCTGGCGGCATGGGGACGGTG TACCGGGCGCGGGATCTGCTGCATGAACAGTACGGCGAACCGTCGCCGTATCTGGCCATCAAGGTGCTAGGTGAAGACGTAGCCGCGGCCCCGGATGCCA GCGCGTTGCTGTACAGCGAATTTGCACTGACGCGACATGTGCGCCATGACAACGTGCTTCGGCTGTACACCTTCGAGGTCGATCAGGACAGTCAGTTGGC CTTTATCAGCATGGAGCTGATGCGCGGGCTGACGCTGGACAAATTGCTGTGCGAGCGCCCCGGTGGGTTGCCGTGGAACCAATTGCGGGAGATCGCCTTG
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Amino Acid Sequence |
>protein phosphatase
MRPTGLWHSAARTDPGKVRARNEDAFLECPQHGLWVVADGMGGHQGGDIASQLIVASLADLPVEVDFDARLKNVRQCLHWLNRRLGQELTVTAGRSDSIM GSTVVAVLMEGNRAACVWAGDSRCYLWRGQRLYQLSRDHSLQQQLIDEQQMSAEQAKAHPSAHALTRAVGASEQLTLDVLELETCPDDAFLLCSDGLYQS LSTDALGHALNLPAPQLALERLFAGALRGEARDNLTAVVIRQ
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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