Pseudomonas fluorescens AU10414, AA048_RS08735
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas fluorescens strain AU10414 Contig_45, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
TGATTCGGCCAGCCTGCCGATCCTGATGTTGACGGCCCGCGACGATAGTCATGATCAGGTGCTGGGGCTAGAGATGGGCGCCGACGATTATGTGACAAAA CCTTGCGAGCCGCGGGTATTACTGGCTCGCGTGCGCACGTTACTGCGGCGCAGCAGCCTGATCGAGCCGCACGTGGCCAATGACCGGATCGTCATTGGCA ACTTGTGCATTGACCTGTCAGAACGCAGCGTCACTTGGCGCGAGCAAGACATTGAGCTGTCCAGCGGTGAATACAACCTGTTGGTGGTACTGGCCCGGCA TGCCGGAGAAGTGCTCAGCCGCGACCAGATCCTCCAGCGTTTGCGCGGCATCGAGTTCAATGGCACCGACCGCTCGGTGGACGTGGCCATTTCCAAGTTG CGGCGCAAATTCGACGACTGCGCGGGGGAAGCGCGCAAGATCAAAACCGTGTGGGGCAAGGGCTACCTGTTCAGCCGTTCCGAGTGGGAATGTTGAAACC
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| DNA Sequence for Gene |
>AA048_RS08735
ATGTTCAAGGTCCTGCTCAGGCTGTATCTGGTCACCATGGTCACGTTCGGCGCTGCCATTTACCTGGTGCCCGAGTTGATCGTCACGCTGTTTCATGATC GGTTCATGAATTACAACGTCGACATGTCGCGCGGTATGCAAACCCTGCTGGTCAAACAATTTCATCAATTACCCGCCGAACAATGGCCCGCGCTGGCCAA AGAGCTGGACAGCCAGTTCGCGCCACTGCGGGTCAATCTGTTGTCGGTCAATGACCCCGCCTTCGATGCCGATGAACAGCGCCAATTGCAGCAAGGGCAG GGCGTGTTGCGCATTGGCGAATGGGGCTGGCGTACGCGGGTGGTGTCGCCTCTGGGCCGGCAGCAGGCGATTGAATTGGTGATGCCTCCCGATCCCTTCG ACATGAACGTGTTGTATTGGAGCATCAACGTGCTGATCGGCGCGGCGTTGCTCGGCTGTTTGCTGCTGTGGCTGCGTCCTCACTGGCGCGACCTGGAACG CCTCAAACGCACGGCGGCCCTGATTGGTCAGGGGCAATTGAGCGAGCGCACCCAGATCTCCCCCCGGTCAAACATTCACGGGCTGGCCAGCGCGTTTGAC ACCATGGCCCAGGACATCGAAAGCCTGCTCAACCAGCAACGCGACCTGCTCAACGCGGTGTCCCACGAACTGCGCACACCCTTGACGCGGCTGGATTTCG GTCTGGCGCTGGTGTTGTGCGACGATCTGCCGCCCGCCAGCCGCGAGCGCTTGCAGCTGTTGGTCGGGCATATTCGCGAGCTGGATGAACTGGTGCTGGA GCTGCTGTCGTTCAGCCGCCTGCAAAACCCGGCGCTGGTGCCGGAACGCGTCGAGGTGTCGCTCGATGAGTTTGTGGACAGCATTCTCGGCAGCTTCGAC GAAGCACTGGAAACCCCCGACATCGTACTGGACGTGCTGCTGCACGGCTCGCAGGAGCGCTTTGCGCTGGACCCGCGGCTGACCGCACGCGCGTTGCAGA ACTTGCTACGCAACGCCATGCGCTACTGTGACCGGCGCATTCAGGTGGGGGTGAATGTCACTGCGCAAGGCTGTGAATTGTGGGTGGACGATGATGGCAT CGGCATTCCTGAAGCGGACCGCGAGCGCGTGTTTGAGCCGTTTTATCGACTGGACCGCAGCCGTGACCGCGCCACAGGAGGCTTCGGTCTGGGGCTGGCG ATCAGTCGGCGTGCCCTTGAAGCCCAAGGCGGAACACTGAGCAGCGAAGCGTCCCCCTTGGGCGGTGCGCGTTTTCGGCTGTGGTTGCCGGTGTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GTCAGATCAAGCGTCGTTGTCGGCTCACGTGCTTGACACCCTCAAGCACCAGCACTGCGACCGCCAGCCAGATCGGGCCGTAAGTCAGCCATTGACCCGC CTCAAGGCTGTCACCGAGCAGCAGGGCGACAGCCACCAGCAACACCGGCTCGACATAGCTGAGCAACCCGAACAGGCTGAAGGGCAGCAACCGGCTGGCC AATATATAAGCGAAGCCCGCCGCTGCACTGATGATGCCCATCAACGGCACAAGCGCGTAGAGCGCTGGCCGTTGTGCGTCCAGATCGACATGCTCGCCGG CCAGCACAAACCACAGCGCCACGGGCACTATCAACAGCATGTCCAGCCATAAGCCGCCCAAGTTATCGATGCCAATTTTCTTACGCAGTACGAAGTACAT CGGGTAGCCGATGGCCACTACCAGCGTGGTCCAGGAGAACCCGCCGGTGCGGTACAGCTCATTAGCCACCCCCAGCACTGCCAGTCCGGTGGCGATTTTT
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| Amino Acid Sequence |
>histidine kinase
MFKVLLRLYLVTMVTFGAAIYLVPELIVTLFHDRFMNYNVDMSRGMQTLLVKQFHQLPAEQWPALAKELDSQFAPLRVNLLSVNDPAFDADEQRQLQQGQ GVLRIGEWGWRTRVVSPLGRQQAIELVMPPDPFDMNVLYWSINVLIGAALLGCLLLWLRPHWRDLERLKRTAALIGQGQLSERTQISPRSNIHGLASAFD TMAQDIESLLNQQRDLLNAVSHELRTPLTRLDFGLALVLCDDLPPASRERLQLLVGHIRELDELVLELLSFSRLQNPALVPERVEVSLDEFVDSILGSFD EALETPDIVLDVLLHGSQERFALDPRLTARALQNLLRNAMRYCDRRIQVGVNVTAQGCELWVDDDGIGIPEADRERVFEPFYRLDRSRDRATGGFGLGLA ISRRALEAQGGTLSSEASPLGGARFRLWLPV
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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