Pseudomonas fluorescens AU10414, AA048_RS05500

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0000155 phosphorelay sensor kinase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd00082
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0016772 transferase activity, transferring phosphorus-containing groups
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00344
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0007165 signal transduction
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd00082
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0016310 phosphorylation
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00344
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PRINTS PR00344 Bacterial sensor protein C-terminal signature IPR004358 Signal transduction histidine kinase-related protein, C-terminal 587 605 2.7E-12
Gene3D G3DSA:3.30.450.20 PAS domain - - 117 195 7.9E-30
PIRSF PIRSF036431 HK_DctB IPR017055 Signal transduction histidine kinase, DctB (C4-dicarboxylate transport system regulator) 8 633 0.0
Pfam PF00512 His Kinase A (phospho-acceptor) domain IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain 411 475 1.6E-6
Gene3D G3DSA:3.30.565.10 - IPR036890 Histidine kinase/HSP90-like ATPase superfamily 475 625 4.1E-34
Pfam PF02743 Cache domain IPR033479 Double Cache domain 1 52 302 6.8E-19
PRINTS PR00344 Bacterial sensor protein C-terminal signature IPR004358 Signal transduction histidine kinase-related protein, C-terminal 574 584 2.7E-12
PRINTS PR00344 Bacterial sensor protein C-terminal signature IPR004358 Signal transduction histidine kinase-related protein, C-terminal 611 624 2.7E-12
SUPERFAMILY SSF55874 ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase IPR036890 Histidine kinase/HSP90-like ATPase superfamily 482 626 2.36E-33
FunFam G3DSA:1.10.287.130:FF:000049 C4-dicarboxylate transport sensor protein DctB - - 385 472 2.5E-33
SMART SM00387 HKATPase_4 IPR003594 Histidine kinase/HSP90-like ATPase 516 627 4.8E-28
CDD cd00082 HisKA IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain 407 473 4.99594E-7
Gene3D G3DSA:1.10.287.130 - - - 385 472 2.1E-18
SMART SM00388 HisKA_10 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain 409 477 3.0E-7
SUPERFAMILY SSF103190 Sensory domain-like IPR029151 Periplasmic sensor-like domain superfamily 82 205 1.79E-15
PANTHER PTHR43065 SENSOR HISTIDINE KINASE - - 227 628 1.7E-46
CDD cd12914 PDC1_DGC_like - - 87 197 2.59747E-10
Gene3D G3DSA:3.30.450.20 PAS domain - - 197 312 2.3E-25
Coils Coil Coil - - 345 407 -
PRINTS PR00344 Bacterial sensor protein C-terminal signature IPR004358 Signal transduction histidine kinase-related protein, C-terminal 556 570 2.7E-12
SUPERFAMILY SSF47384 Homodimeric domain of signal transducing histidine kinase IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily 394 475 2.55E-10
Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IPR003594 Histidine kinase/HSP90-like ATPase 517 625 5.1E-19
Gene3D G3DSA:6.10.250.3020 - - - 52 113 6.3E-8

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.