Strain | Pseudomonas fluorescens strain AU10414 Contig_40, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
AATGCCTTGGCCACGCTGGCGGCTGCCCGCCATGTTGGGGTGGTGCCGAGCATGGCGATTGATGGCCTGAGCGCCTTCAAAAGCGTGAAGCGCCGAATGG AAAAAGTGGCCGAGGTGAAGGGCGTCACGATTTATGACGACTTCGCTCACCACCCGACCGCCATTGCCACCACGCTGGACGGGTTGCGCAAGCGTATCGG CGATGCCCCGTTGGTGGCGATCATTGAACCGCGTTCCAACTCCATGAAACTGGGTGCCCACCGGGATGGCCTGCCGCAGAGCGTGGCCCAGGCCGATCAC GTGGTCTGGTATGCACCGGCCAATCTGGGCTGGGACCTGGCGGCAACGGTTGCATCGAGCCCTGTGTCGACCCGGGTCTGCGACTCGCTGGACGCTATCA TCGCCGACGTCAAAACCCGCGTTAAGCCTGGCACCCACGTGGTGATCATGAGTAACGGCGGCTTTGGCGGGCTACACGGCAAGCTGGCGGACGCGCTGCA
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DNA Sequence for Gene |
>AA048_RS03705
ATGAGTGGCCCGGAACGCATCACCCTGGCCGTAACCGGTGCATCGGGCATGCCTTACGCATTGCGTTTGCTTGATTGCTTGGTGCGCGAAGACCGCGAGG TTCACTTCCTGATTTCCAAGGCCGCACAGTTGGTCATGGCGACTGAGACCGACGTTAACCTGCCGCCCAAGCCGCAGGCCATGCAGACGTTTCTGACCGA ATACACCGGGGCGGCTGCCGGGCAGATCCGTGTGTACGGCAAGGAAGACTGGATGTCGCCGGTGGCCTCGGGTTCCGGCGCGCCGGCCGCGATGGTGGTG GTGCCGTGTTCCACGGGCACGCTGTCGGCCATTGCCACGGGCGCGTGCAACAACCTGGTCGAGCGGGCGGCGGACGTGACGCTCAAAGAGCGTCGCCAGT TGATTCTGGTGCCGCGCGAAGCGCCGTACTCCAGTATTCATCTGGAAAACATGCTCAAGCTGTCGAACATGGGCGCCATCATCTTGCCCGCGTCGCCGGG TTTCTATCATCAGCCGCAGACCATCGATGATCTGGTTGATTTTATGGTCGCGCGCATTCTTAACCTGCTCAATATCCCGCAGGACATGCTCCCGCGCTGG GGCGAGCACCATGTGGGCGGCGATGAGTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GGCGCTGCTGGGCGGGTTGATGCTCCTGCACATTGGCGGTTGCGCCAGCGTTCGCACGCTGGACGCCGCCAAGCCGGGGGCGCCGGTGGTGTATTCGGGT ACGCGGCTCGATTGGTATGCGATGCAAGGCGGGTGCTGTGCGCAAGACCGCTTTGGCGCCCAGCCCCCGCGTTATCCGGGGCTGGACCTGCCTGCCAGCG CCTTGCTGGATACGCTTTTGTTGCCGTTGTCGGTGTTGACCGTGCTGGGGGTCGGCGTCCAGGCCAACGGCGGGCTGTAACGGGTTACTTGCCCAGTTTT CTCAGTTCGTCGGACTCAATCACCCGCACGCCTTGCTGATCTTCAAGCGCCAGTCGCCACAGTGCCCGGGCCAGTTCACAGGCTTCAATGCCGTGGTATT TGCCGGGGATCAATTTTGAAAAAAGACCTGCAATTTTCTCTGCCGGGCGTTCTTCCAGGCGTTCGCCGATGAGCAGAGATGGGCGGGCGATGGTTAACTG
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Amino Acid Sequence |
>aromatic acid decarboxylase
MSGPERITLAVTGASGMPYALRLLDCLVREDREVHFLISKAAQLVMATETDVNLPPKPQAMQTFLTEYTGAAAGQIRVYGKEDWMSPVASGSGAPAAMVV VPCSTGTLSAIATGACNNLVERAADVTLKERRQLILVPREAPYSSIHLENMLKLSNMGAIILPASPGFYHQPQTIDDLVDFMVARILNLLNIPQDMLPRW GEHHVGGDE
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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