Pseudomonas fluorescens AU10414, AA048_RS02800

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas fluorescens strain AU10414 Contig_39, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GGCCCAGCCGATGCACCTGCGCTCAATCCCCCACCTGCGGCAGGTGCTGCACACCGTGCCGGCATTTCCGTGCGTGCTGGTGCAGCACTGCGTGCACGAC GAAATGTGCGGCCGCGATACTGGGCCTGTCGGGGAACTGCGCATTCCGTTTTCGCTCTCCACACCGTTGTGAACACGAAGTCGACGCGCGTGAGCGGATG AGCGTTTTTCGCTGGTTTGGGCGCCCCCTTGCCCTTGGACCTCAGAGGTGACCGTCGCGTCAAACCCCGGTTGATAAAGACCGTGTACCCATACCGAAAA ATGGCTTGCCGCACGGTCAGCCATTTTTTTTGCCTGGGGCAAATCCCCCGTCTCAATCGTCCGCCACGGCCTTTTAAGAATCGTCTGATTAAAGCCCGGT CCTGCCCCCGATAACCTGCACTGGCTGAATCTGCTCCTGACCGACTCCACGAAGAATGGGTTGGGCTCGAGCCTCATCTCCAGTTATCAGGATTATTACT
DNA Sequence for Gene
>AA048_RS02800
ATGAAGCGTACTGCTCTGCTCATCGCGATGACGGCATTCCCGGCGATCTCGTTCGCCGCCAGCCAAAACACCATCACTTTCAAAGGCCAGGTGTCTGACC AGACGTGCCAGGTGTCGGTCAACGGTAACGCTGGCAGCCCGATCGTGGTGTTGCCCACCGTGGCATCCAGTGATCTGGACACCGCAGGCAAGTTCGCCGG TGAAACGCCTTTCACCATCGCCGTGACGGGTTGCACCGCCCCCACCACGGGCGACCTGAACATTCGCACCACGTTCCTGGGTGCCAACGTCAACACAGGC GGCAACCTGGGCAACACCGGAACGGCGCAAAACGTTGCAATCCAGTTGCTGGATGCCAGCGGTGGCACGCCGATCACCCTGAGCGGCATGACGTCGGTTG AAGGCCTGGTGCTGAAAAAAGACGAAACCGCCACCAGCCACGACTTCGCTGCGCGTTACATCAGCACCGGCGCTGCCACGGCCGGTACCGTTTCAGCGTC GGCTCAATACGCCCTCGACTACCTGTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GCGTAACCCCCTGACCTGCCGTCTTCGCGCCTTGCGAAGCGGCGGGTCCGCACCTCGCTTGTCCTTTTCTGTTTTCCCAGCCTTTCGGAAGGAGTTGGCC ATGACCTGCCTGAAACGCTTAGCCCTGTCCGTCGGTTTGCTGATCGGCGTAACGCTTGCCCAGAGCGCGATGGCCAGTGTGGTCATGAGCGGCACGCGGG TGATCTACCCCGCCGCCATTCGCGAAAAAGCCCTGCAACTCACCAGCCATGACGCGTACCCCAATCTGGTGCAGATCTGGGTGGATAAGGGCGACCCGGC GTCGACCCCACAAACCGCTGACGCCCCTTTTATCGCCAGCCCGCAGATTTTCCGGATGAACCCCAAGGCCGGGCAAATCGTGCGTCTGGTGTACACCGGC AAGGACCTGCCGCAAGACCGTGAGTCGGTGTTCTACATCAACTTCATGCAAATGCCCGCGCTCAAGGCTCACGACATGGAAGCCAACAAGCTGATGCTCA
Amino Acid Sequence
>fimbrial protein
MKRTALLIAMTAFPAISFAASQNTITFKGQVSDQTCQVSVNGNAGSPIVVLPTVASSDLDTAGKFAGETPFTIAVTGCTAPTTGDLNIRTTFLGANVNTG GNLGNTGTAQNVAIQLLDASGGTPITLSGMTSVEGLVLKKDETATSHDFAARYISTGAATAGTVSASAQYALDYL
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site