Pseudomonas fluorescens AU10414, AA048_RS12910
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas fluorescens strain AU10414 Contig_34, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GGCGCTGGGTGACAGCGGTAATGCCCCGGCACGTCCGCATTTCGCTGATTTTCTGGTGGGCGCCGGTTACGTCAAGGACCGCGCCGAAGCGTTTCGCAAA TGGCTGGGCGCGGGCAAGTTGGGCGACGTCAAGCAGCATTGGCCGACCCTGGAAGAGACCGTGGGCACTTTGCGGGCAGCCGGGGCCTGGGTCAGCCTGG CGCACCCCTCGCACTACGATTTCACCCGCAGCAAGCGTCGGCGTCTGATTGGCGACTATATTCAAGCGGGAGGTCACGCCATCGAGGTGGTCAATGGCTA TCAACCTGCTGATCAAGTGGGCAGCCTGGCGATTCTCGCCCGTGAGTTCGGTTTGCTGGTGACGGCCGGCAGCGATTTTCATGGCCCGGGAGGCTGGTCC GAGATTGGCGAATACCGCCCGCTACCGGACGACCTGCCGCCTTTGTGGTCCCGTTTCAAACTGGACCCGCCCACAGCCAACGTCTGAACAGGTACACAAC
|
|
| DNA Sequence for Gene |
>AA048_RS12910
GTGAGTCAATTTTTCCATATTCATCCGGAGAATCCTCAGCCGCGTCTGATCAAACAGGCGGTCGAGATCATTAAAAAAGGCGGTGTGGTGATTTACCCCA CCGATTCGTCCTACGCGGTCGGTTGCCAGATGGGCGACAAGCATGCGATCGAACGCATCAAGCGCCTGCGTAATCTGGACGACAAGCACAACTTCACTTT GATGTGCAGCGACCTGTCGCAACTGGGCCTGTTCGCCAAGGTCGATACCGGCACGTTCCGGTTGCTCAAGGCCCATACGCCGGGGCCGTACACCTTCATT CTCAACGCCACCCGTGAGGTGCCGCGCCTGCTGCTGCACCCCAAGCGGCGTACCATCGGCATGCGCGTGCCCAGCCATCCGCTGGCCTTGGCCCTGCTGG CTGAACTGGACGAGCCGTTGATGAGTGTGACGTTGATTCTGCCGGGTGAAACCGAGCCGATGGAAGACCCGTACGAAATCCGCGATGCGCTGGAAAAACA GGTCGACCTGATCATTGATGGCGGTTTCGGTGGGCACAAAGCCAGCACCGTGATCAGTCTGGTGGACGACGAGCCGCAGGTGGTACGGGTCGGCTGCGGT GATCCGACGCCCTTTATGGTCGAGGCCTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
TGTCTGACGTTGAAGTGATTGAACCGGTAGACCCGCAAGCCGATGCGCAGCAAGAGCTGCCGTTCGCCATGGTCTACGGCCAGGCCGTCATTGAAATGCC GCAAGACCTGTACATCCCCCCGGATGCGCTGGAGGTGTTTCTCGACGCGTTCGAAGGCCCGCTCGACTTGCTGCTGTACCTGATCCGCAAACAGAACATC GACATCCTCGACATCCCGGTGGCGGAAATCACTCGCCAGTACATGGGCTATGTCGAGCTGATGAAGACCGTGCGCCTGGAGTTGGCCGCCGAGTATCTGG TGATGGCAGCCATGCTGGCCGAAATCAAGTCGCGCATGCTGCTGCCGCGTTCGGCCGAGGTGGAAGAGGACGAGGGCGATCCGCGTGCCGAACTGATTCG TCGCTTGCAGCAGTACGAGCGTTTCAAAGCCGCGGCCGAAGGCATTGATGGCCTTGAGCGAGTAGGGCGCGACGTGTTTGTGCCCAAGCTTGATGCCCCC
|
|
| Amino Acid Sequence |
>hypothetical protein
MSQFFHIHPENPQPRLIKQAVEIIKKGGVVIYPTDSSYAVGCQMGDKHAIERIKRLRNLDDKHNFTLMCSDLSQLGLFAKVDTGTFRLLKAHTPGPYTFI LNATREVPRLLLHPKRRTIGMRVPSHPLALALLAELDEPLMSVTLILPGETEPMEDPYEIRDALEKQVDLIIDGGFGGHKASTVISLVDDEPQVVRVGCG DPTPFMVEA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|