Pseudomonas fluorescens AU10414, AA048_RS12630
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas fluorescens strain AU10414 Contig_34, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GAAGATTGTGATCAAGGTGCCGCTGACCCTGGCGATCATGCCGACCCTGATGGTGATGCTGGGCAATCAGGCGTTCGCCTTCCCGCTGGTCAACGTGAAC GAGATTTTCCACCTCGACCTGTCGCGCACCAATGTGGTGGACGGCCAGGAAGTGGTGATCGTACGCGACAAGGCGCTGCCGTTGTTCTACCTCAAGCGCT GGCTGGTGGCTTCGGCTGCCCACGAAGAGCAGCGTGAAGGGCATGTGGTGATTCTGTCGGTGGGCACGCAGCGCATCGGTTTCGTGGTCGATCAGTTGGT CGGTCAGGAAGAAGTGGTCATCAAACCGTTGGGCAAAATGCTCCAGGGCACGCCGGGCATGTCGGGCGCCACCATTACCGGTGATGGCCGTATTGCCTTG ATTCTGGATGTGCCGAGCATGCTCAAACGCTACGCCGCACGGCGTATTTGATTCTGGTGGAGCGGGGCGGTTGCGTCCCGCGCCGCCTAACGGAGTGTTT
|
|
| DNA Sequence for Gene |
>AA048_RS12630
ATGGTAGTCAAGGTCCTGGTGGTGGATGATTCTGGTTTTTTCCGCCGCCGTGTCTCGGAGATTCTGTCCGCTGACCCGACGATTCAAGTGATCGGCACCG CCACCAATGGCAAAGAGGCGATTGATCAGGCGCTGGCGCTCAAGCCGGACGTGATCACCATGGACTACGAGATGCCGATGATGGACGGCATTACCGCCGT GCGTCACATCATGCAAAAGTGTCCGACCCCGGTGTTGATGTTCTCTTCCCTGACCCACGAAGGTGCCCGCGTCACGCTGGATGCACTGGACGCCGGGGCC GTGGATTTCCTGCCGAAAAACTTCGAAGACATTTCGCGCAACCCCGATAAGGTCAAGCAACTGCTGTGCGAGAAAGTGCACACCATCTCGCGCAGTAACC GCCGTTTTTCCAGTTACAGCGCACCCCAGCCGCACACCCCGACGCCCGCGCCACGCCCGTCGGTCAGCGGTTTTGCGCCAGCGGGCACGCCTGCCACCCC GGCACCGACCCGCACCACGCCGATTGCCAGCCGCAGTGCGCCCGCCCCGGCGGCCACCGCGAACTCGCCAGCGCCCAAGCGCAAAGCCTACAAACTGGTG GCGATTGGAACCTCCACGGGTGGGCCGGTGGCCTTGCAGCGGGTATTGACCCAGTTGCCAGCCAATTTCCCGGCGCCCATCGTGCTGGTGCAGCACATGC CTGCGGCGTTCACCAAGGCGTTTGCCGAGCGGTTGGACAAGCTGTGCCGCATCAGTGTGAAAGAAGCCGAAGACGGCGACATCCTGCGTCCGGGCCTGGC GCTGCTGGCGCCGGGGGGCAAGCAAATGATGATCGACGGGCGTGGCGCGGTACGTATCCTGCCGGGCGATGAGCGTCTGAACTACAAACCGTGTGTGGAC ATCACCTTCGGTTCAGCGGCCAAGTCCTACGGCGACAAAGTGCTGGCGGTGGTGTTGACCGGCATGGGCGCCGATGGCCGCGAAGGCGCGCGCCTGCTCA AGCAGGGCGGCAGCAACGTCTGGGCGCAGGACGAGGCCAGTTGTGTGATCTACGGCATGCCCATGGCCATCGTCAAAGCCAACCTGGCGGACGCGGTGTA CAGCCTGGATGACATCGGCAAGCACTTGGTCGAGGCGTGTCACTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
TGGATGTACTGAGCCTGATCGGCATCATCATGGCCTTCGTGGCCATCATCGGCGGTAATTACCTCGAAGGCGGTCACCTGGGCGCGCTGGCCAATGGCCC GGCGGCCCTTATCGTGCTGGGTGGCACCATCGGCGCCGCGTTGTTGCAGTCGCCATTGAGCGCGTTCAAGCGCGCCATGCACACCGTGGTGTGGATCTTC TTTCCGCCGCGCATTGACCTGGCGGGCGGCGTGGATCGCGTCGTCAACTGGAGCCTCACCGCGCGCAAGGAAGGCCTGCTGGGCCTGGAAGGCGTGGCAG ATGCCGAACCCGACGATTATTCGCGCAAAGGCTTGCAGTTGCTGGTGGACGGCGCCGAGCCCGAAGCGATCCGCAGCATTCTGGAAGTCGATTTCATGAC CCAGGAAAGCCGCGATATCGAAGCCGCGAAAGTGTTCGAAAGCATGGGCGGCTATGCGCCGACCATCGGCATCATCGGTGCGGTGATGGGCTTGATCCAC
|
|
| Amino Acid Sequence |
>chemotaxis protein CheY
MVVKVLVVDDSGFFRRRVSEILSADPTIQVIGTATNGKEAIDQALALKPDVITMDYEMPMMDGITAVRHIMQKCPTPVLMFSSLTHEGARVTLDALDAGA VDFLPKNFEDISRNPDKVKQLLCEKVHTISRSNRRFSSYSAPQPHTPTPAPRPSVSGFAPAGTPATPAPTRTTPIASRSAPAPAATANSPAPKRKAYKLV AIGTSTGGPVALQRVLTQLPANFPAPIVLVQHMPAAFTKAFAERLDKLCRISVKEAEDGDILRPGLALLAPGGKQMMIDGRGAVRILPGDERLNYKPCVD ITFGSAAKSYGDKVLAVVLTGMGADGREGARLLKQGGSNVWAQDEASCVIYGMPMAIVKANLADAVYSLDDIGKHLVEACH
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|