Pseudomonas fluorescens AU10414, AA048_RS21390

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas fluorescens strain AU10414 Contig_33, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CCGGGCCACACGCCAGCAACTTCCCCCGTCGCAACCGCATCATCAGCGGTTTATCCCTGGGGGTACTGGTCGTGGAAGCCAGCGTGGCCAGCGGCTCGCT GATAACGGCGCGGCTGGCGGCCGAACAGGGGCGAGAGGTGTACGCCCTGCCCGGTTCCATCCACCACCCCGGCGCGCGAGGCTGTCACCAATTGATCCGC GACGGGGCTACGCTGGTGGAAACCGTTGAGCACATTCTGGAAGGGCTGCGCGGCTGGCGCTCAATGCCGGTGTCCACCGGTGGATTGTTCACGCCAAGTT GTCATCCGCTCGTGCAATTGTTGCAGGCATCGCCCTACACCAGCGAAGGCCTGGCCCGTGCCAGCGGATGGGCATTGCCCACCCTGCTCGCCGCCCTGAC CGAGCTGGAGCTAGAAGGCCACGTGGTCCTGGAGGGCGGACGTTGGTTTGCTCGCGCCAGCTAAGTACACTTGCGCACAGCACATATCTGGAGACATTCA
DNA Sequence for Gene
>AA048_RS21390
ATGATCAGCACCTGGCGCGTACAGCAAGCCGCAACCGCCATTCGCGCGGGCGCGGTGATTGCCTATCCCACCGAAGCGGTCTGGGGTTTGGGTTGCGACC CATGGGATGAAGACGCGGTAGAACGGCTGCTGGCCATCAAGTCGCGGCCTGTGGATAAAGGCCTGATTTTGATTGCCGACAATATTCACCAATTCGACTT TCTGTTTGAGGACTTCCCCCAGGACTGGCTCGACCGCATGGCCAGTACCTGGCCGGGGCCGAACACCTGGCTGGTGCCGCACCAGGGCTTGTTGCCCGAG TGGATTACCGGCGTGCACGACACCGTGGCATTGCGTGTGAGCGATCACCCGCTGGTGCGCGAACTGTGTTCATTGGTGGGCCCGATCGTCTCGACGTCTG CCAACCCGGCGGGTTTGCCGGCTGCGCGGACGCGGCTGAAGGTGGAGCAATACTTCCGGGGGCAAATCGACCATGTGTTGGGCGGCAACCTGGGCGGGCG GAAAAACCCGAGCCTGATTCGCGATCTGGCGACGGGCAAGGTGGTCCGCCCGGCCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TTCAACGCGGGGCCGCTGTCGCAGGCCGAGAGGCCTTCGCCAGCGGCTGCCGGCGGGTTGAGATCAAGGCACCAGAATGGTCGAGCCGGTCGTGCGGCGT GCTGACAGTTCGGTCTGTGCCTTGGCGGCGTCTTTCAAGGCAAAGCGCTGGCTGATGTCCACCGTAATGTTGTCGCTGCGGATCATCTCGAACAGCTCGT CTGCCATTTTTTGCAAGTTCTCGGGGGTATTGGCATACGACGCCAATGTTGGCCGTGTGACATACAACGAGCCCTTCTGCGACAAAATCCCCAGGTTTAC ACCCGTCACGGCGCCTGATGCGTTGCCGAAGCTGACCATCAGCCCCCGCGGCGACAGGCAGTCCAGAGACGTCAGCCACGTGTCTTTACCGACGCCGTCG TACACCACCGGGCATTTCTTGCCGTCGGTCAGTTCCAGAACCCGCTGGACCACATCTTCGTGGCTGTAGTCGATGGTTGCCCACGCGCCCAGCTTTTTGG
Amino Acid Sequence
>tRNA threonylcarbamoyladenosine biosynthesis protein RimN
MISTWRVQQAATAIRAGAVIAYPTEAVWGLGCDPWDEDAVERLLAIKSRPVDKGLILIADNIHQFDFLFEDFPQDWLDRMASTWPGPNTWLVPHQGLLPE WITGVHDTVALRVSDHPLVRELCSLVGPIVSTSANPAGLPAARTRLKVEQYFRGQIDHVLGGNLGGRKNPSLIRDLATGKVVRPA
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site