Pseudomonas fluorescens AU10414, AA048_RS19845
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas fluorescens strain AU10414 Contig_33, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GGACCCGAACCTGTCGGTGATCCTCGAAACCCTCACCGCCAACGGCACTCAGCAAATCATGGCGCAAGGCTACTTGCCGGGGATCAAAGACGGCGACAAG CGCATCCTGATGATCGACGGCGAGCCTGTTCCCTATTGCCTGGCGCGCATTCCGGCGCAGGGCGAAACACGCGGCAACCTGGCCGCCGGTGGTCGCGGCG AAGCCCGCCCGTTGAGTGACAAGGATCGCTGGATCGCTGAACAGGTCGGCCCGACCCTGCGTGAAAAAGGCTTGTTGTTCGTAGGACTGGACGTAATCGG TGAGCACCTGACCGAAATCAACGTCACCAGCCCGACCTGCATCCGCGAGATCGATAACGCGTTCGGCACCAACATCGGCGCACTGCTGATGGACGCCATT GAGCGCAAACTGGCCGCTCGCTGATTTCTATCCGCCAGACACAGACCAACATTGCGTTATCATGCGCAGCCTGTGAAACCCGCGATGTTGGTCTTTTGCC
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| DNA Sequence for Gene |
>AA048_RS19845
ATGACACTTCCCAGCGACCTGCCCTCTGAACTCACGCACGGCGGCGTGCGCGCGGCTGATCGTCTGGGGTTTACGCTGTTTGTCGCGGCACTGATTCACC TGGCGGTGATCCTGGGCGTCGGGTTCAGCATGAGCGAGCCCAAACAGATCAGCAAAACCCTCGAAATCACCCTGTCCACGTTCAAGAGCGAGAAGGCACC GAAGCAGGCGGACTTTCTGGCGCAGGACAATCAGCAAGGCAGCGGCACGCTGGACAAGAAAGCCGTGCCCAAAACCACAGAAGTGGCGCCGTTTCAGGCC AACGAAGTCAAAAAGGTCACGCCGCCCCCTGCCGCCCGGCCCGAACAAAAGCAGGCCGCCCCCAAAGCCGCCGTCACCACCGTGGCGCCAAAGCCCAAAA AAGCCACGCGCGAGCCGCAGAAGGTCATCACCGAGGCCGCGCCCAAGGCCAGCATTCCGTCGTTTGACAGCTCCCAACTGTCGAGCGAGATCTCCAGCCT CGAAGCCGAACTGGCCAACGAGCAACAGCTGTATGCCAAAAGGCCCAAGATCTACCGCATGAGTGCGGCCTCGACCATGCGCGACAAAGGCGCCTGGTAC AAAGAGGACTGGCGCAAAAAGATCGAGCGCATCGGCAACCTCAACTACCCCGAACAGGCACGCCGCGAAAAAATCTACGGCAAGCTGCGGCTGCTGGTCT CGATCAATCGCGACGGTTCGCTGCATGAAGTACTGGTGCTCGAATCTTCCGGCCAGCCGTTGCTGGATCAGGCAGCGCAGCGCATCGTACGTCTGGCCGC GCCGTTCGCGCCGTTCACCGGTGACCTGGCCGACATCGACCGCCTCGAAATCATCCGCACCTGGAAATTCGCCCAGGGCGACCGGCTGTCCAGTAATTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TGCCGGGGTAAATGAGCGCTCGCGCCGCGTAGCCCAAGCGGGTTTCAAGGCGCGCCATCTGCCAACTTGTCAGTTTCACTTGTCAGCGCCACACTAAGGC TCATGAAAAACCGCGCACCGACCTACCTCAAGCATCAGTTCCTGATCGCCATGCCGCACATGGCTGACCCGAATTTTGCTCATTCCTTGACGTACATCGT CGAGCACACGGCCAATGGGGCGATGGGCCTGACCATCAATCGGCCGCTGGACCTCAACCTCAAAGATATTCTTGAGCAGTTGCGCCCCGAGCGCGCCGTG CCCGAGCTGTGCGAGCACGTGCCGATTTATGCAGGCGGCCCGGTAATGACCGACCGCGGTTTTGTCCTGCACCCCGCCAGCATGAGTTTCGACGCCACGG TTGAGCTGCAAGAGGGCTTGGCGCTAAGCACGTCACTGGATGCCCTGGGCAGCATCGCCGACGGCAATGGCCCGCGACGCAGCCTGATTTGCCTGGGCTA
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| Amino Acid Sequence |
>energy transducer TonB
MTLPSDLPSELTHGGVRAADRLGFTLFVAALIHLAVILGVGFSMSEPKQISKTLEITLSTFKSEKAPKQADFLAQDNQQGSGTLDKKAVPKTTEVAPFQA NEVKKVTPPPAARPEQKQAAPKAAVTTVAPKPKKATREPQKVITEAAPKASIPSFDSSQLSSEISSLEAELANEQQLYAKRPKIYRMSAASTMRDKGAWY KEDWRKKIERIGNLNYPEQARREKIYGKLRLLVSINRDGSLHEVLVLESSGQPLLDQAAQRIVRLAAPFAPFTGDLADIDRLEIIRTWKFAQGDRLSSN
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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