Pseudomonas fluorescens AU10414, AA048_RS16900

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas fluorescens strain AU10414 Contig_3, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
TGACCTTTGTAGGAAAAGCGCGTAGTGCCATCGGGCATCAAGCCTTTGCCCTGAGTCGAGCGAATCGCCTGACACAGGTTGGTCTTGCCCGACAGGCAGA ACTTACATTGGCGACATTCCGGGGTGTACAGCGGAATAACGTGATCGCCTACCGCTACCGAGGTAACGCCCTCACCGATCGCTTCAACGATTGCGCCGCC TTCATGGCCCAGAATCGACGGAAAAATACCTTCCGGGTCTGCACCCGACAGGGTGTACGCATCGGTGTGGCAAACGCCCGACGCCACCACCCGCACCAGC ACTTCACCTGCCTTGGGCATGGCAACATCCACTTCCACGATTTCCAGCGGCTTTTTGGCCTCGAAGGCTACGGCAGCACGTGACTTGATCATCGATCGTC TCCAGCAAAGTAAAAACAAGACATGGAGTGTAAATCAGCGCTGGCTGATTAATAATCCGGCCAAAAGCAAAACATTATTGCCAGGCAGGGACAATCCTCC
DNA Sequence for Gene
>AA048_RS16900
ATGAACGAGAACCGCTGGGAAGGTATAGACGAATTTGTTGCCGTCGCAGAGTGCGGTCAATTCACGGCGGCCGCCGAACGACTCGGGGTGTCGTCTTCCC ATATCAGCCGTCAGGTGGCACGGCTGGAGGAGCGCTTGCAGACGCGATTGTTTTACCGCAGCACCCGGCGCGTGACACTGACCGAAGCCGGGCAGACGTT CCTGCAACATTGCCAGCGTTTGCAGGATGGACGCGAAGAAGCGTTACGTGCGATAGGCGACCTGGCCAGCGAACCCAAAGGGCTGCTGCGCATGACGTGC GCTGTGGCTTATGGCGAACGCTTTATCGTGCCGCTGGTCACGCGATTTATGGCTTTGTACCCGCAGTTACGGGTGGACATTGAACTGAGTAACCGCCCGC TGGACCTGGTGCACGAAAGCCTGGACCTGGCCATCCGGCTCGGCCGGTTGCAGGACTCACGCCTGGTAGCCACTCGCCTGGCCCCACGGCGCATGTACCT GTGCGGCTCCCCTTCCTACCTGGAACGTTACGGACGCCCACACAGTGTGTCGGAACTGGGCCGGCACAATTGTTTGATTGGCAGCTCGGACCTCTGGCAG TTGCAACAAGACGGCAGGGAATTTTCGCAGCGCGTACAAGGCAACTGGCGTTGTAACAGTGGGCAGGCGGTGCTGGATGCGGCGCTGTTTGGCGTAGGGT TGTGTCAATTGCCCGACTACTACGTGCTTGAGCATTTGAAAACCGGCGCGCTGGTGTCCTTGCTGGAACCGCATCAACCCCCCAACACGGCCGTCTGGGC CCTTTACCCACAACAGCGGCACTTATCGCCCAAAGTCAGACAGTTGGTGGATTATCTGAAAGCAGCACTGGCCACACGCGAAGAGTACTCAACCGCCCAG CAGTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GTTCACTTGCGCACGGGGTTGAGCGCCTTTGGGGAGGAAAACGGATCGATGTTTGCCATGCAATGGATTGCAGCCTTTATGCCGCGGCCGCATCGGCCTA GGCAGGATGCTCCGGTGTTAGCGGTTAACCCACCGTAATCGCAGCCACTCAAGGTCTTCAGGACGCGTCACCTTGATGTTGTCCGAACGACCTTCGATCA AGCGCGGCGACAAGCCTGCCCACTCCATGGCTGAAGACTCATCAGTGATGTTGGCATCCGCGACAAGGCTATCGGCTAGCGCACGATGCAGTGCGCCGAG ACGAAACATCTGCGGCGTATAGGCCTGCCATATGCATTGACGATCAACGGTTTCGACTACGCGGCCCTGCTTATCGACCCGCTTCAAGGTGTCGCGCGCC GGCACCGCGAGCAAGCCGCCCACCGGGTCATCCGACAACTCACCGAGCAGTTTATCCAGATCCTCTCGGGCCAGATTGGGCCGCGCTGCATCGTGCACCA
Amino Acid Sequence
>LysR family transcriptional regulator
MNENRWEGIDEFVAVAECGQFTAAAERLGVSSSHISRQVARLEERLQTRLFYRSTRRVTLTEAGQTFLQHCQRLQDGREEALRAIGDLASEPKGLLRMTC AVAYGERFIVPLVTRFMALYPQLRVDIELSNRPLDLVHESLDLAIRLGRLQDSRLVATRLAPRRMYLCGSPSYLERYGRPHSVSELGRHNCLIGSSDLWQ LQQDGREFSQRVQGNWRCNSGQAVLDAALFGVGLCQLPDYYVLEHLKTGALVSLLEPHQPPNTAVWALYPQQRHLSPKVRQLVDYLKAALATREEYSTAQ Q
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site