Pseudomonas fluorescens AU10414, AA048_RS07410
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas fluorescens strain AU10414 Contig_21, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CAGCGGCTGCCAGTTGTCGATGGTCAACGGGTCAATCAGGTAGGCCCGCTCCCCGTCGCCGATCTGAATCAAACCGGCAATGGGGTAAAAGGTGTCGACC CGCATGAATTCGGTGTCGAGGGCTACAAACGGCAAGTGCTGCCATTGGGCGCAATGTTGGCCGAGGCTATCGTTGTCGCGGATCCAGTGAATATCGATGG CCACACGGCTCTCCCTTGAAGAATGGCGCGCAGTATATATCGGCATCAGGCATTTCCGGCGATTGACTGACAAACTTGTCGACGAAAAAACCTACACAAA TTCGGGCCTCTACCTTCAACACACGCGCCGGTTAAATGTGTATTTTCACCCGGCTCGCGCTTCGAACAGCGTTAGCAGCACGCTCACACCGGTGATCAAA CGCAACGCGACTCCGTCTTCAAGAAACATTCAGTGACAAGGCCGTACCCTGTACCCGGCACCACCAGCCCTGTTCCCACATCGACCAGAAGGACGCCCTC
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| DNA Sequence for Gene |
>AA048_RS07410
ATGCGCCAGCTGTTTAAACGCACTGCCACTGCCCTTTCACTGTCCGGTTTGTGCGCCATGAGCCTGCCCGCCATGTCCGCAAGCCTGGACAGCACCGTGC AAGAGGCCGCCCAGGCGGTGATGCAGCAATACAACGTGCCCGGTCTGGCCATCGCCGTCAGCGTCGAAGGTAAGCAGCAGTTCTTCACCTTCGGTGTCGC CTCAAAATTGACGGCCACCCCGGTGACCGCCGACACGCTGTTCGAAGTGGGCTCCATCAGCAAAACCCTGACCGCGACCCTGGCTACTTACGCTCAGGCC AATGGGCAACTGTCACTCACTAACACGGTGAGCACGTACCTGCCCGAATTACGCAACACCCCGTTCGGCAACGTAACGCTGATCGGCCTGGCCACTCACA CGGCCGGCGGATTTCCGTTGCAGGTGCCCGATGAGGTTCAAAACGATGCACAACTCATGGACTACCTCAAAGCCTGGCAACCGACGTACCCGCAGGGCAC CCAGCGCAGCTATGCCAACCCCAGCATCGGCATGCTGGGGGTGATCGCCGCCAAACGCATGAACATGCCCTACACCGAGGCCATGCAAGACCATTTGCTG CCGGCATTGGGGATGAAAAGCAGCTATCTGCAGATCCCTGACAGCGAGATGCACCGCTACGCTCAGGGGTACAACAAAGAGGATGCGCCCGTACGTTTAG GGGCAGGCGTATTGGCGGACGAAGCCTACGGCCTCAAAACTTCGGCGCGCGACCTGATCCATTTCGCCGAGCTGAATGCAGGTCTTGGCCAGGTCAGCCC CCCCCTTCGCCGGGCCCTGGACACCACCCATACCGGTTACTTCCGGGCCGGGCCCATGACCCAGGACCTGGTGTGGGAGCAATACCCCTACCCGGTCACA TTGGCTGCACTGGTCGAGGGCAATTCGAACGCCATGGCCTACGACACTCAACCGGTTGAGGCCTTGAATCCACCGCTGGCCCCGCGCGCAGACAGCTGGA TCAACAAGACCGGCTCAACCAATGGCTTCGGTGGCTACATCGCGTTCGTGCCCGCCAAAAAGCAGGCCGTGGTCATCCTTGCGAACAAAAATTACCCGAA CGAAGCCCGGGTGAAATTGGCTCATGCGCTTTTCGAGGCGTTGAATTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CTGCCTTTGCGCAACACGAAAATGCTGCCCGCCGTGTGGCCGGGCAGCACATCGTATTGTTTGAGCACGCTGAAACCCGCCTGTGAAAACTGGGCTTCGA TTGCGTCCTTGGTCACCCAGATGCGCTGCGGATTTTGCGAGGGTTTAATGAACAGCGACAGGATCAACGTGTCACGGCTGACCCGGTGCAATTCGCGCAA GATCGCCAGACGGTGCTCGCTGTCACGCACATGGTGAAACAGCTGCATGCAAAAAATGCAGTCCACGGCGTTTTCAGGCATATCGATGGTAAACACCGAG CTTTTAAACAAGGTGACACGCGCCAGCAAGCCCGTCGAATGGTGGGTTCGGGCGTGATCGAGCATGCCCTGAGACGGGTCGGCGGCCAGAATCACCCGGT TGCCATGCTCGGCCAACAACGGCCAGAAACGCCCGGCACCGCACGCCAGGTCCAGCACCAGCCCTGGCTCGCCCGCCACTTTGAGCGCGCGCCGAATCAG
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| Amino Acid Sequence |
>hypothetical protein
MRQLFKRTATALSLSGLCAMSLPAMSASLDSTVQEAAQAVMQQYNVPGLAIAVSVEGKQQFFTFGVASKLTATPVTADTLFEVGSISKTLTATLATYAQA NGQLSLTNTVSTYLPELRNTPFGNVTLIGLATHTAGGFPLQVPDEVQNDAQLMDYLKAWQPTYPQGTQRSYANPSIGMLGVIAAKRMNMPYTEAMQDHLL PALGMKSSYLQIPDSEMHRYAQGYNKEDAPVRLGAGVLADEAYGLKTSARDLIHFAELNAGLGQVSPPLRRALDTTHTGYFRAGPMTQDLVWEQYPYPVT LAALVEGNSNAMAYDTQPVEALNPPLAPRADSWINKTGSTNGFGGYIAFVPAKKQAVVILANKNYPNEARVKLAHALFEALN
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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