Pseudomonas fluorescens AU10414, AA048_RS01125

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas fluorescens strain AU10414 Contig_16, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CACGTGTTGTCCGTTGCGCTGAGCAAGGCAGGCATCCAGGCCCGCAGTGCCGCGATGTCGATGCCAGACACACTGGTGATGTGTAAAACCATTCAAGTTG AAACCGGCCTGAACGAGCAGGACCTTGAACTGCACGTGCGCCTTGAAGCGGAACACTACGTCCCATACAACCTCGATGAAGCCGCGCTGGATTTCGACGT GTTGGGGCCTTGCGCCGATGACCCGTACCGCACGAACGTATTGCTGGTGGTGTGCCGCCAGCAAGCGCTTGAGTGGCATCAATCGGTTCTGGTGCAGGCT GGCTTGCAGGCGAAGGTCATTGATGTGCGCGATCACGCCCATGCCCGGGGCCTGCACTGGTTGAGTGGCGTGCCCGGTTATCAGCCGGACAACCCGTTTG CCGGGGTGAAAATCCATCCCCGCCTCGCGCCCGAAGCACTCTTCTGCGATGCTGCGCAGCTGTTGACAGCCTGTGGTCTGGCCTTGAGGGGGTTCGATTG
DNA Sequence for Gene
>AA048_RS01125
ATGGCGCGAATCAATTTGTTGCCATGGCGTGAGTGGCTGCGCGAAAAGCGCCGCAAAAGGTATATAGGCATGCTGGTGGCGTTGCTGGTAGTCACGGCTG CGGGTTTGTTTGTGCTGGATCATTTTGTGGACCGCGCCGTGGAGCGGCAGTTGGCGCGTAATGACCTGATCAGGAGCGCCATGGTCCAGTTGGATGGGCG TGCGCAGCAGATCGATCAGTTGAAAGTACGTCGCGAGCAATTGCTGGAGCGCATGCAAACCATCGAGACCCTGCAAGGCAATCGTTCGGGCAGCAGCATC GTGCTTGATCAACTGGCGCGCAGTTTGCCGGAAGGTGTGTACTTCACTGACGTGAAGATGGCCGAGCGCACCATTGCGATCACAGGGGTGGCGCAGTCCA CTGCACGGGTCGCCGAGTTGATGCGCAATCTCGACGCCTCCCATTGGCTTGAAGCCCCCACGTTGATTGAAGTGCGCGCCGAAGACGGTCAGGACGCCAG CCCCGCCCGGTTATTTCACATGACCGTGCTGCAATCGCAAAACGGCCATGATGGCGGGCAGTTCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TGGTCGCGCACTGGCTGGAGAGCCTGCGTACGGTTGACCTGCATGAGTTGAATCTCAAACAGGCCGGGACGTGGTCAGGCAAGCGTAAAGCAGGTGTCGC GACCGGGTTTGTGGCGTTGCTGGTGCTGGCGGGTTATGCGCTCTGGTTGCAGCCCGGGCTGGCCCGGCTTCATGAGCAACGCAGCGCCGAGCCCGTACTC AAAGCCCAACTGGCAAACCGTGCCCAAGAGGCAGCATCACTGGTTGATCACCACCAGCACCTTCAAGCATTACAAACGGCCTTCGACGAGGTGATGCGGC AACTACCGCGCCAGTCCCAGGTGCCGGGGCTGCTGGATGAAGTGTCCCGGCTTGCCCAAAACAGCGGCCTGATCATCGAGCAGATCCAGTGGTTGCCTGA AACACTGCAACCCGCTTACAGCGAGCTCCCTCTGCAATTGAGGGTCGTGGGCGGGTATCACGACCTTGGGGTTTTTCTCAGTGGTATTGCGGGTTTGCCA
Amino Acid Sequence
>pilus assembly protein PilN
MARINLLPWREWLREKRRKRYIGMLVALLVVTAAGLFVLDHFVDRAVERQLARNDLIRSAMVQLDGRAQQIDQLKVRREQLLERMQTIETLQGNRSGSSI VLDQLARSLPEGVYFTDVKMAERTIAITGVAQSTARVAELMRNLDASHWLEAPTLIEVRAEDGQDASPARLFHMTVLQSQNGHDGGQF
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site