Pseudomonas fluorescens AU10414, AA048_RS00945 (proY)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas fluorescens strain AU10414 Contig_16, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CCGTTTCTGGTGGGCAATGGCGGCGTCAACTCCGGTTTCATGATTGCTCAAGTGACCGCCGCAGCTTTGGCCAGCGAGAACAAAGCGTTGTCCCACCCCC ACAGTGTCGATAGCATTCCGACGTCGGCGAACCAGGAAGACCACGTGTCCATGGCGCCTGCTGCGGGCAAGCGCTTGTGGGAAATGGCTGAAAACGTGCG CGGTGTATTAGCTATCGAGTGGCTGGCGGCTTGTCAGGGGCTCGACTTGCGCGATGGCCTGAAAACCTCGCCGAAGCTGGAAATTGCGCGCACCACGCTG CGTGAAAAAGTGGCGTTCTATGAAAAAGACCGTTTCTTCGCCCCGGACATCGATGCGGCCATGCAACTGCTGGCCTCGCGTTGCCTGAACGCGCTAGTGC CTGCGCGGATGCTGCCAAGCCTGTAATCACGTCGCGGCAGAGGGCCTTGAGCCCTCTGTGCGGTGGTGTGCGCCGACAAAAATAATTAAGGACGCGCGAA
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| DNA Sequence for Gene |
>AA048_RS00945
|proY
ATGCACAAGCAAGCTCAAGGTTTGAAGCGCGGGCTGACGGCTCGCCACATCCGTTTCATGGCGCTGGGTTCAGCGATCGGGACGGGGTTGTTTTACGGTT CGGCTGCGGCCATCCAGATGGCTGGCCCCGCGGTCTTGCTGGCGTACCTGATAGGTGGCGCCGCCGTATTCATGGTCATGCGCGCACTGGGCGAAATGGC CGTGCGCGATCCGGTGTCCGGGTCGTTTGGCCATTACGCCAGCACCTATTTGGGCCCGATGTCGGGGTTCATCCTCGGTTGGACCTACGCGTTTGAAATG ATCATCGTGTGCCTGGCCGATATCACGGCATTCGGCATTTACATGGGGTTCTGGTTCCCCGACGTGGCGCGCTGGATCTGGGTACTGGGCATCGTGCTGC TGATTGGCGGCCTGAACCTGTGCAGCGTCAAAGTCTTTGGCGAGATGGAATTCTGGCTGTCGCTGCTCAAAGTCGCCGCCATCGTGGCGATGATTCTGGC CGGTTTCGGCATCATGCTGTTTGGCATCGGCAGCGCGGGCAGTGCAGACGCCGCCGCGACCGGGATCAGCAATTTGTGGTCGTTTGGCGGCTTTATGCCC AATGGCGTGGGCGGGTTGATTGCCTCGTTTGCGGTGGTGATGTTCGCGTTCGGCGGCATTGAAATCATTGGCATCACGGCCGGTGAGGCCAAAGACCCGG AACGTGTGATCCCCAAAGCGATCAACGCCGTGCCGTTGCGTATCTTGCTGTTCTACGTGCTGACCCTGTTTGTACTGATGGCCATTTACCCTTGGACGCA GATCGGTAGCCAGGGCAGTCCGTTTGTACAAATTTTCGACAGCCTGGGCATCAGCTCGGCGGCGACCCTGCTCAATATCGTGGTGATTACTGCGGCGGTG TCGGCGATCAACAGCGACATCTTCGGGGCGGGTCGCATGATGTATGGCCTGGCCCAGCAAGGCCATGCGCCAAAAGGCTTCGCACAGATTTCGCGCCATG GCGTGCCGTGGATGACCGTGCTGGTGATGGGCGTGACCTTGCTGGCCGGTGTAGTACTCAATTACCTGATCCCGGAAGACATCTTCCTCATCATTGCCTC GATTGCGACCTTCGCCACGGTGTGGGTGTGGCTGATGATTCTGGTCACGCAAATCGCCATGCGCCGCTCGATGACGGCCGAAGAAGTGGCGCAGCTCAAG TTTCCGGTGCCGTTCTGGCCGTATGCTCCGATCGCGGCCACGGTGTTCATGGTGTTTATCTTCGGCGTGCTGGGCTATTTCCCTGACACCCGTGCGGCAC TGATTGTGGGCGCCGTCTGGATTGTATTGCTGATCGTGGCGTATCGGTTGTGGGTAAAACCGTTAGCCGGGCATGCGGTCAAAGCCCAGCCCGAGTTGTC CTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TCCCAACGTTTAACGGCGGAGTGAGTGAATGAAAACGCTTTGGCAACACTGCAATGTCGCAACCATGGCCGAGGGTGCGTACTCGATCATCGAGGACGCC GCCATTGTGACGTGTGAAGGCTTCATTGAGTGGATCGGCCCACGGCTGCACGTGCCCCACGGTGAGTACAGCCAGACCCATGGCCTGGAAGGCGCGTGGG TGACGCCGGGCCTGATCGATTGCCACACGCACACGGTGTTCGGCGGCAACCGCAGCGGTGAGTTCGAGCAGCGTCTGCAAGGCGTCAGCTATGCCGACAT TGCGGCCGCCGGGGGCGGAATTGCCAGCACCGTGCGTGCGACCCGTGCTGCCAGCGAAGAGGAATTGTTCGCCAGTGCGCGTCAGCGTTTGATGTGTCTG CTGCGCGACGGTGTTACCAGCGTGGAGATCAAATCCGGCTACGGTTTGAGCCTTGAAAGCGAGCGCAAAATCTTGCGCGTGATTCGCCGTCTGGGCGACA
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| Amino Acid Sequence |
>proline-specific permease
MHKQAQGLKRGLTARHIRFMALGSAIGTGLFYGSAAAIQMAGPAVLLAYLIGGAAVFMVMRALGEMAVRDPVSGSFGHYASTYLGPMSGFILGWTYAFEM IIVCLADITAFGIYMGFWFPDVARWIWVLGIVLLIGGLNLCSVKVFGEMEFWLSLLKVAAIVAMILAGFGIMLFGIGSAGSADAAATGISNLWSFGGFMP NGVGGLIASFAVVMFAFGGIEIIGITAGEAKDPERVIPKAINAVPLRILLFYVLTLFVLMAIYPWTQIGSQGSPFVQIFDSLGISSAATLLNIVVITAAV SAINSDIFGAGRMMYGLAQQGHAPKGFAQISRHGVPWMTVLVMGVTLLAGVVLNYLIPEDIFLIIASIATFATVWVWLMILVTQIAMRRSMTAEEVAQLK FPVPFWPYAPIAATVFMVFIFGVLGYFPDTRAALIVGAVWIVLLIVAYRLWVKPLAGHAVKAQPELS
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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