Pseudomonas fluorescens C3, VC34_RS09630

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas fluorescens strain C3 FCC4LTTACXX-wHAIPI007897-94_L5_1_(paired)_contig_8, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GCCGATACCGTTCTGGGTAATGGTGTGAAGCTCGACAACCAGATTCAGATCGCCCACAACGTGCAGGTTGGTGATCACACCGCCATGGCCGCGTGCGTGG GGATCTCCGGCAGCACCAAAATCGGCAAGCATTGCATGCTCGCCGGTGGCGTAGGGCTGGTGGGGCATATCGAAATTTGCGACAACGTTTTCATCACCGG GATGACCATGGTGACCCACTCGATTACCGAAAAGGGTTCCTATTCTTCCGGTACAGCCATGCAACCGGCAGCCGAATGGCGCAAAAGCGCGGCCCGTATC CGTCAGCTCGATGACATCGCGCGGCGTTTGCGACAGCTGGAAAAGCGTGTAGGGGAAGTGACCCCTGACGGTAATGCTTCATCAGATGGCTGATACCATT TCCATATCAAGTGTGCACAGCCGCTAGACTGCCTCCTTGATTTGCTAGAGGGGTGCGCGTCAGTCGCGCCTCCCAATCTTTACATAGGCTTCCCCCCGAA
DNA Sequence for Gene
>VC34_RS09630
ATGATGGACATCAACGAGATTCGCGAATACCTGCCTCACCGTTACCCGTTCCTGCTGGTGGACCGGGTCGTGGATCTGGATGTGGAAGGCAAGCGCATTC GCGCCTACAAGAATGTCAGCATCAACGAACCCTTCTTCAATGGTCACTTCCCTGCGCATCCAATCATGCCGGGTGTGTTGATCATCGAAGCGATGGCTCA GGCTGCCGGCATCCTTGGCTTCAAAATGCTCGACGTGAAGCCTGCCGACGGCACGCTCTACTACTTCGTCGGCTCCGACAAGCTGCGTTTTCGCCAGCCC GTCACCCCAGGCGATCAGTTGATCCTCGAAGCCCGCTTCATCAGCTGCAAGCGTCAGATCTGGAAGTTCGAGTGCCAGGCTTCGGTCGATGGCAAGCCAG TCTGCTCTGCTGAAATTATCTGCGCGGAACGCAAACTATGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GTTTGATTGACCCTCGCGCAATCATCGATCCGACGGCTATCCTGGCCGACGGCGTCGAGGTCGGCCCTTGGTCGATCATCGGTGCAGGTGTGGAAATCGG CGAGGGGACAGTGATCGGGCCGCATGTGATTCTCAAAGGCCCGACCCGAATCGGAAAGCACAACCGCATCTACCAGTTTTCTTCGGTAGGCGAGGACACG CCCGATCTGAAATACAAGGGTGAAGAAACTCGCCTGGTCATCGGTGACCACAACGTCATCCGTGAAGGCGTGACGATTCACCGTGGAACCGTTCAGGACC GTTCTGAAACAACCCTGGGCGATCACAATCTGATCATGGCCTATGCCCACATCGGCCACGACAGCGTCATCGGCAACCACTGCATCCTGGTCAACAACAC CGCGTTGGCGGGCCATGTGCACGTTGAAGACTGGGCGATCCTGTCCGGTTTTACCCTGGTTCACCAGTATTGCCATATCGGCGCCCACAGCTTTTCCGGT
Amino Acid Sequence
>3-hydroxyacyl-ACP dehydratase
MMDINEIREYLPHRYPFLLVDRVVDLDVEGKRIRAYKNVSINEPFFNGHFPAHPIMPGVLIIEAMAQAAGILGFKMLDVKPADGTLYYFVGSDKLRFRQP VTPGDQLILEARFISCKRQIWKFECQASVDGKPVCSAEIICAERKL
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site