Pseudomonas fluorescens C3, VC34_RS09090

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
SUPERFAMILY	SSF55073	Nucleotide cyclase	IPR029787	Nucleotide cyclase	299	457	9.42E-48
NCBIfam	TIGR00254	JCVI: diguanylate cyclase (GGDEF) domain	IPR000160	GGDEF domain	290	453	1.1E-46
Pfam	PF03707	Bacterial signalling protein N terminal repeat	IPR005330	MHYT domain	77	129	5.7E-17
Pfam	PF00990	Diguanylate cyclase, GGDEF domain	IPR000160	GGDEF domain	294	450	1.2E-48
SMART	SM00052	duf2_2	IPR001633	EAL domain	465	712	3.1E-107
Pfam	PF03707	Bacterial signalling protein N terminal repeat	IPR005330	MHYT domain	206	258	4.3E-7
FunFam	G3DSA:3.30.70.270:FF:000001	Diguanylate cyclase domain protein	-	-	289	456	2.8E-45
Coils	Coil	Coil	-	-	259	286	-
Gene3D	G3DSA:3.20.20.450	EAL domain	IPR035919	EAL domain superfamily	466	732	4.1E-97
CDD	cd01949	GGDEF	IPR000160	GGDEF domain	295	450	2.2822E-61
SUPERFAMILY	SSF141868	EAL domain-like	IPR035919	EAL domain superfamily	470	721	4.32E-86
Gene3D	G3DSA:3.30.70.270	-	IPR043128	Reverse transcriptase/Diguanylate cyclase domain	278	455	1.0E-55
PANTHER	PTHR44757	DIGUANYLATE CYCLASE DGCP	-	-	280	719	0.0
FunFam	G3DSA:3.20.20.450:FF:000001	Cyclic di-GMP phosphodiesterase yahA	-	-	466	722	2.7E-91
Pfam	PF00563	EAL domain	IPR001633	EAL domain	471	707	1.1E-75
SMART	SM00267	duf1_3	IPR000160	GGDEF domain	283	455	6.6E-62
Pfam	PF03707	Bacterial signalling protein N terminal repeat	IPR005330	MHYT domain	138	189	8.3E-13
CDD	cd01948	EAL	IPR001633	EAL domain	474	712	9.27773E-110

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.