Pseudomonas fluorescens C3, VC34_RS07030

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas fluorescens strain C3 FCC4LTTACXX-wHAIPI007897-94_L5_1_(paired)_contig_5, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GGCGGTCGGCTACTGGAACATCAGCCCGGAACGCTTCCTCGACCAGCCGGCGGCAAAGATCGATGAAACCGCGATCGACTATTACGCGATCAACGCCCAC AGCGTGCAATACCTGCCGGACGGCAAACTGCAATACGAAATGACGTCCGACAAGGTTGAACACCTGAAAGCCACCGAAGTGACGCTGTTGACCAATCCCG ACCTGAACATGTTCCGCGGCACCGAGTTTCCGTGGCATGTCCAGAGCGAGCACGGCGAAGTGAATCCCGATGGCACCCAGGTCGAACTGATTGACTCGGT GCGCATCACGCGCTTCGACGAGAAAAACCGCAAGACCCTGATTACCACCACCCGCATGACAGTGTTCCCGCAGCAGCAATATGCGCAGACCGAGCAACCC GTTAGAATTGACGGCGCTGGTGGTGTGTCGACTGGCAAGGGAATGAAAGCGTATTTGAAAGAAAGCAGGATACACCTGCTATCTAACGTAAGAGGACAGT
DNA Sequence for Gene
>VC34_RS07030
ATGAGGCTCGTTAAAACCCTCCCTATTTTGCTCGGTCTGAGCGCAGCACTGGGAAGCGTGAGCGCCTGGGCTCTGCCGACCGATCAAGCGCAGCCTATCC GCATCCAGGCCGACGACGCCCAGCTGGACGACAAGAATGGCATTGCCACCTATAAAGGTGACGTGATCATCACTCAGGGCTCGATGATCGTTAAAGGCAA TACTGTGACCATCACCCGCACCCCGACCGGCGACATCGACGTGGTGACTTCGGTGGGCAACCTCGCCTATTTCGAGCAACTGCAAACCCAGGGCGACACC AAGCCTGTTCAGGGCTGGGGAGTGACTATTCAGTACCACGCCTCGCAAAACCGCGTTGTGCTGATCGACAAGGCGAAAGTCATCGACAAGGACAGCAACG TCACCCAAGGCGAGAAAATCGTCTACGACACGGTCAAAAAGCTTGCGAGCGCTGGTCGCGCGACGGGCAACAAGGTCACCGAGTCGCGTCCGCGCATCGA CATGGTGATCCAGCCGAAGAAGAAAACCGACGAGCAAAAGGCCCAGTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TGGCAACTCTGAAAGCTCAGCATCTGGCCAAGAGCTACAAGAGCCGCCAGGTCGTGCGTGACGTCAGCCTGTCGATCGACAGCGGTCAGATCGTCGGCCT GCTGGGTCCCAACGGCGCCGGCAAGACCACCTGCTTTTACATGATTGTCGGCCTGGTACAGGCCGATCAGGGCCGCGTACTGATTGACGACCTGGATGTC AGCCACCAGCCTATGCACGGTCGTGCGAAGGCCGGCATCGGCTATCTTCCGCAAGAAGCATCGATCTTCCGCAAACTCTCGGTAGCCGACAACATCATGG CGATCCTCGAGACCCGCAAGGAACTCGACAAGGCCGGTCGTCGCAAAGAGCTGGAAAGCCTGTTGCAGGAATTCCACATCAGCCACATCCGCGACAACCT CGGGATGAGCCTGTCCGGTGGTGAACGCCGCCGTGTGGAAATCGCCCGGGCACTGGCCACCAACCCGAAATTCATCCTGCTCGACGAACCGTTCGCCGGC
Amino Acid Sequence
>organic solvent tolerance protein OstA
MRLVKTLPILLGLSAALGSVSAWALPTDQAQPIRIQADDAQLDDKNGIATYKGDVIITQGSMIVKGNTVTITRTPTGDIDVVTSVGNLAYFEQLQTQGDT KPVQGWGVTIQYHASQNRVVLIDKAKVIDKDSNVTQGEKIVYDTVKKLASAGRATGNKVTESRPRIDMVIQPKKKTDEQKAQ
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site