Pseudomonas fluorescens C3, VC34_RS04640

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas fluorescens strain C3 FCC4LTTACXX-wHAIPI007897-94_L5_1_(paired)_contig_3, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
ACAGCCCGGCTTCGGCCGGGCTTAGTTGTGTCTGGGGCCTTCGAAAATCGACTCAAAACACAACATGTAGTGAAAAACGCAGTTTTTTGGCTGTTTTTTG AACAAAAAAATGGCTAGCCAAAATTTATGAAAAAAAATCTTCACTCCCGACATCCAGCCAAAGCCCTATAAACCCTCGCTCCGACCGAAAAACCCTCCTT CTCGACCGCTCCATGCGCGGATTCGCCCCACCACGGCCGCAAAAATTTCCCTATAATGCCGCCTTAACGGGCCTGCAATATTCCCTTACAGGGATAACAG CCAGTCTGAAGCCCACGCCGAAGTCTTCACCGATTTCTGCGCCCCTCAGAGGCTCTCGGAACCCCGTACAAAATTATGTTTATTTGCCTGCGTGTACCGC TGCAAAAAACGCTATCCAACGCGGCCAGTACGGCCGTGTGAAAAACCAACCTATCAGTTTTCACACGGGCATCTGGCCCTCACGCAGGAGACGACACGTC
DNA Sequence for Gene
>VC34_RS04640
ATGCTGAGCTGGGACGAATTCGACAAAGAAGACAGCGGCGAAACCGTTGTAAAAGGCGCCAACGCCGGGCACGCAACTGAAGCCAACATGGACCGCCTCG ACACCGCTGGTGGCGTCGCGGCTCAAGAAGCCCGCGCTGTAACCGCGTCCGACTCCGCCGCAATCGCCCGTGCAAAAGCTGCCCTGGACAACCTCGACAT CGCCGAAGGCCTCGCCGAACTCGAAGGCGCCTCCGCCCGTGTGGCTGTCGACGAAAAGCGCATGATCAACTGCCGCGCCGACCTCAACCAGCTCGTTCCT TTCAAGTACGACTGGGCCTGGCAGAAGTACCTGGACGGCTGCGCAAACCACTGGATGCCGCAAGAAGTCAACATGACCGCCGACATCGCCCTCTGGAAAG ACCCGGAAGGCCTGACCGACGACGAGCGCCGCATCGTCATGCGCAACCTCGGCTTCTTCTCCACCGCCGACTCCCTGGTTGCCAACAACCTGGTGCTGGC CGTGTACCGCCTGATCACCAACCCGGAATGCCGCCAGTACATCCTGCGCCAGGCGTTCGAAGAGGCGATCCACACCCACGCCTACCAGTACTGCATCGAA TCGTTGGCCATGGATGAAGGCGAGATCTTCAACATGTACCACGAGATCCCATCGGTCGCGAAAAAAGCCACCTGGGGCCTCAAATACACCCGTTCGATCT CCGATCCGAAGTTCGAAACCGGCACCGTCGAAACCGACAAAGAGTTGCTGCGCAACCTGATCGCCTACTACTGCGTTCTGGAAGGCATCTTCTTCTACTG CGGCTTCACCCAGATCCTTTCCATGGGCCGTCGCAACAAAATGACCGGCGTCGCCGAGCAGTTCCAGTACATCCTGCGCGACGAATCCATGCACCTGAAC TTCGGCATCGACGTGATCAACCAGATCAAAATCGAAAACCCACACTTGTGGGACGCTGAAATGAAGGAAGAAGCTTCGCAGATGATTCTGCAAGGCACTC AGCTGGAAATCGAATACGCTCGTGACACCATGCCTCGTGGGGTGTTGGGCATGAACGCGGCGATGATGGAGGACTACCTCAAGTTCATCGCTAACCGTCG TTTGAGCCAGATTGGTTTGAAAGAAGAGTATCCAGGGACGACTAACCCGTTCCCTTGGATGAGCGAGATTATGGACTTGAAGAAAGAGAAGAATTTCTTT GAGACGCGGGTTATTGAATACCAAACCGGCGGTGCGCTTAGCTGGGATTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TTTCCTAGCTAACCGTGATTTGACGATTGCACTCTGAATCGAAAAATCGAAAAGCAAAAGCCCCGATCTGATCGGGGCTTTTTTATTGGGGAATGAAAAA CTTTTTTCCTTCCCTACGCTACGACGCTAAAACTCCTACAGCACTTACAGCTCCGTCCGCATTGATGCCCTGTCAAAGCACCTCTAAGCTCCATTGCAGG TGCCTAAGAAACGCCCAACGTAGAAGCTTGGTCAATCACACAGACACGCAACTCACCCTTTGGTGATTTGTCGTTCGGATGTGCGAAGGCTGTGCTCGTT GGGATTTCTTAAGTCCACTCTACGTTGGGTTCAGGCCCTCCAAAATCTAAACGTAGAGGTAATGGATATGCCTAAACATGATCGACCCCACACTCTCGGA ACTCTGGAGATCAGCTATGTCTGATCCCTTCTCGGTAATGGCCTTCTCCCGACACAACCTTGTCCTCCACGCCCTTCTCCTGGAAAACCAAACTTGGTTC
Amino Acid Sequence
>ribonucleotide-diphosphate reductase subunit beta
MLSWDEFDKEDSGETVVKGANAGHATEANMDRLDTAGGVAAQEARAVTASDSAAIARAKAALDNLDIAEGLAELEGASARVAVDEKRMINCRADLNQLVP FKYDWAWQKYLDGCANHWMPQEVNMTADIALWKDPEGLTDDERRIVMRNLGFFSTADSLVANNLVLAVYRLITNPECRQYILRQAFEEAIHTHAYQYCIE SLAMDEGEIFNMYHEIPSVAKKATWGLKYTRSISDPKFETGTVETDKELLRNLIAYYCVLEGIFFYCGFTQILSMGRRNKMTGVAEQFQYILRDESMHLN FGIDVINQIKIENPHLWDAEMKEEASQMILQGTQLEIEYARDTMPRGVLGMNAAMMEDYLKFIANRRLSQIGLKEEYPGTTNPFPWMSEIMDLKKEKNFF ETRVIEYQTGGALSWD
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site