Pseudomonas fluorescens C3, VC34_RS22700

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas fluorescens strain C3 FCC4LTTACXX-wHAIPI007897-94_L5_1_(paired)_contig_29, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
ACGCTGAGTTGGTTGCCAGGTCAATGCCTGACTCAGGCTATCGTGTTGTGCCGCTGGCACAATTCGACCCCACTGGATTTATCCAGCAACACCAGGGTTG GCTGACCGTCCACATCACCTGTGGTTTTTCCTCGCAGCGCGACACGTTACGACTTGCAGATGGTGACTTGCCAAGCTTGGGCTGGTTTATTTATGCCCAG ACAGGTCCCTGGAGTCCGGGGCGCTTTATCCATTGGGGCGAAGAAGTCGCCGAGATATTGCTCAGTGCTTACCGCAGCGTTGGTATGCCCAATTACAACG CCTGGCTCAACCAGCTTGATGACTATTCCACGCAGGCCATGGACAACTGCGTCGAAATCGCCTGGCAGACGTTGCTGGCCTGCCGTCCCATGCGCGAAAA CCACCGAGCACTGTTCAACCCTATGGATGAGTGCTGGCGCTTTTCCGACTCGCCCATCGACCCCTATTACCCCATTTGAAACCTTGAAAAGGAACTTCCC
DNA Sequence for Gene
>VC34_RS22700
ATGAGTGGCAAACCTGCTGCCCGAGTGACAGACCCCACCAATTGCCCGCTTCCGGGGCATGGCACGAATCCGATTGCCAGCGGCTCCCCTAATGTGAACT TCGATGGCCTTGCCGCCGCTCGTATGACCGATAAATCCGCATGCGGGAGCCCGATCACCGGTGCCGTCAGTGCTACGGTGCTCGTCAATGGGCTGAATGC CGCTACTCAAGGCAGTACCGGTGGCCACGGCAACGTGGTTATCGCTGGATCCGGCACGGTCATTATTGGCGACACCTTCGTACCAGCCCCCTTCAGCGGC CTGCTGCCGATGCCAGTGCACTTCAGCGACAAGTTCAGACTAGTTGACCAAGACTCGGGCGAGCCTCTACCCAATCTTGATTACACCATCCAGCGCGCTG ACGGCAGCATGGAACACGGTGTAAGTGATTCGATGGGGTATACGCATCTAGTGAGTTCGCACCTGCCCGAAACAATCAAACTGTTTCTGGAGGACTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GGCATGGCAGCAGATGCTCTTCATACAACCGACTGCACACAATCCTCCCCAGACCAAAGAACAAGTTTCATTATTTCTGTTTTCCCAAAGGGGCAGACAG AGAGCGTCAAAATCTATATTGGTGACTTTCATCATGGCTGAAGTGGTTAGCAAGAATGGCAGAAAAATGTCTCCCGTGGCCACCAGAGCGGTGACGCCCG TCAAAGACGCCACTCCAAAAACTGTATCACTGGACGCCAGGAAACAGATAAGGCGGGCCGAGAATGAGGAGTATTTGAAGGATAAGAACGTGAAGGCATT TTTGGTTGCCATTGCCGAATCCGAAGGCGGTAGCTACCACGCGAAATATGGTTATGGCTGGGCACCGGGTTTTCAATCCGGGAAATGGACTTTCACTGAT GAGTCCACCCATCCGGGGGCCGGTTACGGCGGAAAAACTACGGCATCGGGCATGTATCAAATTACCATTGCCACTTGGAGCGAGTATGCCGGAAAGATGG
Amino Acid Sequence
>PAAR repeat-containing protein
MSGKPAARVTDPTNCPLPGHGTNPIASGSPNVNFDGLAAARMTDKSACGSPITGAVSATVLVNGLNAATQGSTGGHGNVVIAGSGTVIIGDTFVPAPFSG LLPMPVHFSDKFRLVDQDSGEPLPNLDYTIQRADGSMEHGVSDSMGYTHLVSSHLPETIKLFLED
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site