Pseudomonas fluorescens C3, VC34_RS03435
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|
Functional Classifications Manually Assigned by PseudoCAP
|
|
Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| SMART | SM00062 | AABind_6 | IPR001638 | Solute-binding protein family 3/N-terminal domain of MltF | 38 | 271 | 4.8E-60 |
| CDD | cd13688 | PBP2_GltI_DEBP | - | - | 30 | 268 | 1.14953E-101 |
| Gene3D | G3DSA:3.40.190.10 | - | - | - | 133 | 228 | 2.3E-96 |
| FunFam | G3DSA:3.40.190.10:FF:000052 | Amino acid ABC transporter substrate-binding protein | - | - | 133 | 228 | 1.5E-39 |
| Pfam | PF00497 | Bacterial extracellular solute-binding proteins, family 3 | IPR001638 | Solute-binding protein family 3/N-terminal domain of MltF | 39 | 269 | 1.4E-49 |
| PANTHER | PTHR30085 | AMINO ACID ABC TRANSPORTER PERMEASE | - | - | 14 | 294 | 5.0E-76 |
| Gene3D | G3DSA:3.40.190.10 | - | - | - | 29 | 273 | 2.3E-96 |
| SUPERFAMILY | SSF53850 | Periplasmic binding protein-like II | - | - | 1 | 272 | 8.07E-60 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.