Pseudomonas fluorescens C3, VC34_RS01955

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas fluorescens strain C3 FCC4LTTACXX-wHAIPI007897-94_L5_1_(paired)_contig_2, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
ACGCCTGCTGCCGTACCTCGGTTTGCTCAGCTTGCGGGCGCACTCGGCGGCGCTGATCGAAGCGGTGCTGCGTTACTACTTCAAGCACGCCGAACTGACC ATCGAGCAGTGCATCGAGCGCCGCGTCGAAATCCTCGACGAGCAGCGCAATCGCTTGGGCCGCGCCAACAGCCTGCTCGGCGAAGACCTGGTGCTGGGCG AACACGTGCGCGACCGCAGTGGCAAATTTCGCATTCACATCCGCGAACTCGACTGGCAACGCTTCCACGAATTCCTGCCGATCGGTTTCGGCTACCAGCC GCTCTGCGCGCTGGTGCGGTTCACCCTGCGTGACCCGCTCGATTACGACATTCGCCTGGTGCTGCGCCAGGAAGAAATCCGCGAACTGCGCATCGGTGAG CAGAACGCCTGTCGCCTGGGATGGACCAGTTGGCTCGGCCGCGAAAAAGCGGATGGCGTGGTGACCCTGGGCAGCAAAATTCATTAAGGACAGATGACCA
DNA Sequence for Gene
>VC34_RS01955
ATGATCAACGTAGACCTGCAACAACTTATCCAGGCGCTGGACGCCGAAACCCGTCGTGACCTGGAAAGTTCGGCCGAACGCTGCGTCGCCCGTGGCGGCA GCAAGATCCTCGTCGAAGACTTGCTGCTGGGCTTGCTGGAGCGCCCACAAGGCTTGCTCGCACGCGCGCTGCAAGACGCCGAAGTCGATGCCGGTGAGCT GAGCGCCGCGTTGCAATCGCGGGTCGAGCACAGTGCGTCGCGCAACCCGGTGTTCGCCCCGGAACTGGTGCAGTGGCTGCAAGACGCGTTGCTGGTGGCC AACCTTGAACTGGGCCAAAGCCAGGTCGAACAAGCCGCGTTGATCCTCGCGCTGTTGCGCAACCCGATGCGCTACGCCGGCAGCCGCTACCAGTCGTTGC TGTCCAAGCTGAACATCGAACGCCTGAAAGAATTCGCCCTGTCGCAGAAAGAACAGCCGGCCACCGGCAAACCTGCCGTGCCGGGCGAATCGCTGCTGCA GCGCTTCACTCACAACCTGACTCAACAGGCCCGCGACGGCAAACTCGACCCGGTGTTGTGCCGCGATGGCGCGATCCGGCAGATGGTCGACATCCTCGCC CGTCGCCGCAAAAACAACCCGATCGTGGTCGGTGAGGCCGGCGTCGGTAAAACCGCCATCGTCGAAGGCCTGGCCTCACGCATCGCCGCCGGTGAAGTGC CGCAAGTCTTGAAAGGCGTTGAGTTGCTGTCGCTGGACATGGGCCTGTTGCAGGCGGGCGCCAGCGTCAAAGGTGAGTTTGAACGTCGCCTCAAAGGCGT GATCGACGAAGTCAAAGCCTCGCCGAAACCGATCATCCTGTTCATCGACGAAGCTCACACACTGATCGGCGCGGGCGGCAATGCCGGCGGTTCCGACGCG GCCAACCTGCTCAAGCCAGCCCTGGCCCGTGGCGAGTTGCGCACCATCGCCGCCACCACCTGGGCGGAGTACAAGAAGTACTTCGAAAAAGACCCGGCCC TGGCCCGTCGTTTCCAGCCGGTACAACTGCACGAACCGACCGTCAGCGAAGCGGTGACCATCCTGCGTGGCCTGGCTCAGGTCTACGAGAAGAGCCACGG CATCTACCTGCGCGATGACGCGGTGGTTGCGGCGGCCGAGTTGTCCGCTCGCTATCTCGCGGGCCGTCAGTTGCCGGACAAAGCCGTCGACGTGCTCGAC ACCGCCTGCGCTCGCGTGCGCATCAGCCTCGCCGCCGCCCCGGAAAGCCTTGAACGCCTGCGTGGCGAACTGGCTGAAGGTGGCCGTCAGCGTCAGGCCC TGCGTCGTGATGCCGAGGCCGGTCTGCTGATCGATCGCGAAGCGCTGGACGCTTTGGAAGATCGTCTGGCCGAAGCCGAAGATGAAATGGTCGCCCTCGA AGCGCTGTGGACTGAGCAGAAAGAACTGGCAGAGCGCCTGCTGGACCTGCGTCAGCAATTGGCCAAGGCTCGTGAGGTCGCCGCCGTCGTGCCTATTGTC ACGGTTGAAGAAGATGCCGAAGGCACCGTGATCGAAACGCTGCCGGTGGACGAAGCGCAAAGTGTTGAAACCCTGGAAAGCGCACTCAACGAAACTCACA AAGCGCTGACCGAGCTTCAGTTCAAAGAACGTCTGGTGAGCTTCGAAGTCTGCCCGCGTCTGGTGGCGGAAGTGATCAGCGCCTGGACCGGCGTGCCATT GGCCCAACTGGCCCGCGAACACAACGCCAAAGTCGCGAGCTTCGCCACTGACTTGCGCACGCGCATCCGTGGTCAGGAACAAGCTGTTCACGCCCTGGAC CGCTCGATGCGCGCCACCGCTGCCGGCCTGAACAAACCTGATGCGCCGGTGGGCGTGTTCCTGCTGGTCGGCCCGAGCGGCGTCGGCAAGACTGAAACTG CGCTGGCCCTGGCGGACTTGCTGTACGGCGGTGATCGTTTCATCACCACCATCAACATGTCCGAGTTCCAGGAGAAACACACCGTCTCGCGCCTGATCGG TGCACCGCCGGGCTACGTCGGTTACGGCGAGGGTGGCATGCTCACCGAAGCTGTGCGGCAGAAGCCGTACTCCGTCGTCCTGCTCGACGAAGTTGAAAAG GCTGACCCGGACGTACTGAACCTGTTCTACCAAATCTTCGACAAAGGCGTGGCCAACGACGGCGAAGGGCGCGAGATCGACTTCCGCAACACGCTGATCC TGATGACTTCGAACCTGGGCAGCGACCGCATCGCCGAGCTCTGTGAAAACGGCGCACGGCCGTCTGCCGAAGTCCTTGAAGAAACCATCCGCCCGGTGCT GAGCAAACACTTCAAGCCGGCGCTGCTGGCGCGCATGCGTGTGGTGCCTTACTACCCGGTCGGTGGCCCGGTGCTGCGCGAGCTGATCGAAATCAAACTC GGCCGTTTGGGCGAGCGCCTGAACCGTCGTCAGCTGGATTTCACTTACTGCCAAAACCTCGTCGATCACCTCGCCGAACGCTGCACCCAAAGCGACAGCG GCGCGCGCCTCATTGACCATTTGCTGGACCTGCACGTGCTGCCGCTGGTGGCTGACCGCTTGCTCGATGCGATGGCCACGGGCGAAAGCCTCAAGCGTGT CCACGCGACGCTAGACGGCAACGCCAGCGTGACGTGCGAGTTCGCCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GGTGGGTGTGATGTTCACTCAAGTGCCGCAACCGCTGGTCTATGCCGAAGCCTTGCTGGCGCAGTTCGCCAGCCTGTCGCGCGCGGCGGACGGTGCTGCG CTGCTGGGTGACTTCGTGCGCGGGTTGGCCGAGCTCAGCGGTTGCGAGTTGACGCAGCTGTACCTGCTGGACGCGACTCACACGTGCCTGGGGATGAACG CCGAGTGCCTCAACGGCATCCTGCAACCCCGGGAAGCGGCGAGCCTGCCGGCGGATTACAACGGTGAACAACTGCTGCAATTCGCCCTGTGCCAGAACCG CGTGGTGTGTCTCAGCGAATTGAGCGGCAGCCTGCACGAAACCAGTTTCCTGCCGCCTCAGGCCATGCCTTGGCAGTCGCTGTTGTGCGTGCCGCTGGTC AATCAGCAGAAAGCCGTCGAAGGCTTGCTGCTGTGCGCCAGTCGCCGGCATGTCGACCTGCAAGGCTTTGCCGATTCCCTCGGTCAACTCGGTTCGTTCG
Amino Acid Sequence
>ATPase AAA
MINVDLQQLIQALDAETRRDLESSAERCVARGGSKILVEDLLLGLLERPQGLLARALQDAEVDAGELSAALQSRVEHSASRNPVFAPELVQWLQDALLVA NLELGQSQVEQAALILALLRNPMRYAGSRYQSLLSKLNIERLKEFALSQKEQPATGKPAVPGESLLQRFTHNLTQQARDGKLDPVLCRDGAIRQMVDILA RRRKNNPIVVGEAGVGKTAIVEGLASRIAAGEVPQVLKGVELLSLDMGLLQAGASVKGEFERRLKGVIDEVKASPKPIILFIDEAHTLIGAGGNAGGSDA ANLLKPALARGELRTIAATTWAEYKKYFEKDPALARRFQPVQLHEPTVSEAVTILRGLAQVYEKSHGIYLRDDAVVAAAELSARYLAGRQLPDKAVDVLD TACARVRISLAAAPESLERLRGELAEGGRQRQALRRDAEAGLLIDREALDALEDRLAEAEDEMVALEALWTEQKELAERLLDLRQQLAKAREVAAVVPIV TVEEDAEGTVIETLPVDEAQSVETLESALNETHKALTELQFKERLVSFEVCPRLVAEVISAWTGVPLAQLAREHNAKVASFATDLRTRIRGQEQAVHALD RSMRATAAGLNKPDAPVGVFLLVGPSGVGKTETALALADLLYGGDRFITTINMSEFQEKHTVSRLIGAPPGYVGYGEGGMLTEAVRQKPYSVVLLDEVEK ADPDVLNLFYQIFDKGVANDGEGREIDFRNTLILMTSNLGSDRIAELCENGARPSAEVLEETIRPVLSKHFKPALLARMRVVPYYPVGGPVLRELIEIKL GRLGERLNRRQLDFTYCQNLVDHLAERCTQSDSGARLIDHLLDLHVLPLVADRLLDAMATGESLKRVHATLDGNASVTCEFA
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site