Strain | Pseudomonas fluorescens strain C3 FCC4LTTACXX-wHAIPI007897-94_L5_1_(paired)_contig_2, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
ACCGGCGAAAGCCACAAGTGCGCGTCCAGGCTGCCGGGACGGTGATCGTGATCATGCTCGTCGGCTTCTTCAGCGTGGGAGTGGCTATCTTCGGCGAAAC GTCGCAGTTTCAGGCCCGGTAAATCCTGCACGGCGACGCTGGGCAGCGTACGACCATTCAGCACGCGAGGCAGGAAACCTTCCATGCTCGGACCGATCCA GTAAACCAGATCCACCGATTGCACCTTCCGTACGTCGGATGGGCGCAAGGCGTAGTTATGCGGGGAGGCGCCGGGTGGCAGCAAGACTTCCGGAATCGCC ACACCGTCCTGCACCGCCGCAGCGATCAGCTGTAGAGGCTTGATACTGGTGAGAACTTTGACTTCGGCGTGAGCTGAACCCATCAGCAGAAAACTGGCGA CAAATGCGACAAAGATAGAAAAAAGTCGGGACACGATGACCACTCGAAGAGGCGAGAACGGGTAACATAATAACGTCTCTCACAAAACTCGTCGCCGCTC
|
|
DNA Sequence for Gene |
>VC34_RS01055
ATGCCTAAAACACCGATTGCCAGCCGTCCCCACGACCACTCTCATTGCGTCCATAGCGCATTGTCTGAGGCCGATGTTCTGTGCGCACGTCAAGGCCTGC GCCTGACCGCCTTGCGCCGGCGGGTGCTGGAACTGGTATGGCAAAGCCACAAACCGTTGGGTGCCTACGACATTCTCGCGGTGCTCAGCGAGCAGGACGG CCGCCGTGCGGCGCCGCCGACCGTGTACCGTGCGCTGGATTTCCTGCTGGAAAACGGCCTCGTACACCGCATCTCTTCGTTGAACGCCTTCGTCGGCTGC AATCACCCGGAGCACGCCCACCAGGGCCAGTTCCTGATTTGCCGCGAATGCCACGCCGCCATCGAGCTCGAACAGAAATCCATCAGCGACGCGATCATCA GTAGCGCCAAGGATGTCGGATTTGTCGTCGAGGGCCAGACCGTTGAAGTGGTCGGCCTCTGCTCAGGTTGCCAGGGGGTTTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
DNA Sequence Downstream of Gene |
TGAGCAACGCGCTGATCCGCCTCGAGCAGGTTGCCGTCACCTTTGCCGGGCAAAACGTGCTGGATAACATCGAGCTGAGCGTCGAGCCCGGGCAGATCGT CACCCTGATCGGCCCTAACGGCGCCGGCAAGACCACGCTGGTGCGCGCTGTACTCGGTCTGTTGAAGCCGGACAGCGGTAGCGTGTGGCGCAAGCCGAAA CTGCGGGTCGGTTACATGCCGCAAAAACTTCACGTCGATCCGACGTTGCCGCTGTCGGTGCTGCGCTTCTTGCGTCTGGTGCCGGGCGTGGACCGCGCCA TGGCCTTGGCGGCACTCAAGGAAGTCGGCGCCGAACAGGTGATCGACAGCCCGGTGCAAAGTGTTTCTGGTGGCGAAATGCAGCGGGTGCTGCTGGCCCG GGCATTGCTGCGCGAGCCGGAACTGCTGGTGCTCGACGAACCTGTGCAAGGCGTCGACGTGGCGGGTCAGGCCGAGCTCTACAGCCTGATCACACGATTG
|
|
Amino Acid Sequence |
>Fur family transcriptional regulator
MPKTPIASRPHDHSHCVHSALSEADVLCARQGLRLTALRRRVLELVWQSHKPLGAYDILAVLSEQDGRRAAPPTVYRALDFLLENGLVHRISSLNAFVGC NHPEHAHQGQFLICRECHAAIELEQKSISDAIISSAKDVGFVVEGQTVEVVGLCSGCQGV
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|