Pseudomonas fluorescens C3, VC34_RS14520

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas fluorescens strain C3 FCC4LTTACXX-wHAIPI007897-94_L5_1_(paired)_contig_17, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
AGGACAGGGGAATATCCAGGTCCAGCAAGTGGCTGTGCACGCCGCGCACGCCAAGGCTACGGTCGCTTTCGGCGGCGGTCAGCAAGGCGTCGATGACTTT GAGACGGATCAGACTGGTTCGCAGACCAAAGCTCTTGAGCAGCAGCCTGATCCGCTCGTTGCCATTGCGCTCACTTCGTTGACTGAGAACACCGGAGCCC ATGGCAGAGCCCTTTGGCGCATTGCTACCGTCCGTTGGCAGTTGCGAGTTGTACATGCAAAAACTCCTTTTCCGAGCCGGCCAGGAAATGTGATGGGTGC TCTCATTTAATAAGACGTACGAGCAGGGCAAATAATGAAGTCCCGAATGTAGAAATTTTGTCGCCGTCACGTCAGCGGCCTGTGAGATGCCCGTGAAAAG CGCCTTACACGGCCTAAATTTTTGTCATTTGTTTCGTTTCCAAGGGAAGGCGCAGTGCGTGTATGACGCAGGGTGTTTGTCTTTTCGATCAGGAGCGAGC
DNA Sequence for Gene
>VC34_RS14520
GTGATTATTTCCAGGCAGTTAACCCGGTTGAGCCTTGCAGGCGTGTTGGTGGGCTTGAGTCTTGCGGCAAACGCACGCAGCCAGCCGGAGCAGGCGAGCG CCGACATTCGCCGGACCAGTTTCGGCGTGCCGCATATCCGTGCCGACAACGAGCGCGGGCTCGGTTATGGCATTGGTTACGCCTACGCTCAGGACAACCT GTGCCTGCTGGCCAATGAGATCACCACCGTGAACGGTGAACGTTCACGCTATTTCGGCCCGGATCAGTTCACGGTCGAAGAACGCGAAAACCTGGTCAGC GATCTGTTTTTCAATTGGCTGAACACGCCACAGGCCGTCGAGGGTTTCTGGCAGACGCAAACCCCGGCAGTGCGCGATCTCATCGAAGGGTATGTGGCGG GCTACAACCGTTCGCTGACAGAGCATCGGGCGCAGGGTTTGCCGCCGCAGTGTCAGGGCGACTGGGTGCGCGAAATAACCATCCAGGATCTGGTCAAGTT GACGCGGCGCCTGCTGGTCGAAGGCGGAGTAGGGCAGTTTGCCGAAGCCCTGGCCGGCGCGACGCCACCCAAATCCGTTACTCATGTGGCAGGCGACCCC GTGTCGTTCCAGGTGGCTGCCTCGCGCATGCAGCGTTTTGCCCTGGATCGCGGCAGCAATGCCGTGGCAGTCGGCAGTGAACGCTCTTTCAACGGCCGCG GCATGTTGCTGGCCAATCCGCATTTCCCTTGGGTAGGCGGGATGCGTTTCTATCAAATGCACCTGACCATTCCCGGCAAACTGGACGTCATGGGCGCAGC GCTGCCGGGGCTGCCGATGATCAACATCGGTTTCAACCAGCACCTGGCGTGGACCCACACCGTGGACTCGTCCAAGCATTTCACCTTGTATCGCCTGCAA CTCGATCCCAAGGATTCAACCCGTTATCTGCTCGACGGCAAGTCATTGCCGATGAAGAAACAGACCCTGACCGTGGACGTGAAACAACCGGATGGCCAGA CCCGACCGGTTTCTCATGTGGTCTACAGTTCGCAGTTCGGCCCGATCGTGCAATGGCCCGGAAAACTCGACTGGGACAACCAGTTCGCCTACAGCCTGCG CGACGCCAATCTGGACAACGACCGGGTCTTGCAACAGTGGTATGCAATGAACCGCGCGGTCAGCCTCAAAGAGTTGCAGGCCTCGGTGCACAAGATCCAG GGGATCCCGTGGGTCAACACCCTGGCGACGGATGATCAGGGGCAGACGCTGTACATGAACCTCTCGGTCGTGCCGAACGTCAGTGCCGACAAACTGGCCA GGTGCAGTGATCCGCGGGCCGGGTTGCAGATGATCGTCCTCGACGGTTCCAACAGCGCGTGTGCCTGGGACATCGACCCGCAGGCTGCGCAAAAAGGTAT TTATGCGGCAGACAAGTTGCCGCAGCTGTTGCGCAAGGATTTTGTGCAGCACTCCAACGATTCGGCCTGGATGGCCAACCCGGCGCAACCGCTCACCGGT TTTTCGCCACTGATCAGCCAGGACGGCCAGCCATTGGGTCTGCGCTCACGCTTTGCACTGGATCGCCTGAACACGTTGAACAAGGCCGGCCCGATAGCCG CGGCGGATCTGCAACACATGGTGATGGACGACCAGGTGTATCAGGCGGCACAAGTAATGCCGGACCTGCTGCAGTTCTGCGCGGCGGCCCTGGGTTCCGA TGCGCCAGCGCTCACGCCGCTGTGTGCCAGTCTCAAGGTTTGGGATCGCAGTGCGAATCTGGACAGTGGTCTGGGGTTTGTGCATTTCCAGAATGTCATG GTTTCGCTGCAGCAAACGCCTGATCTGTGGCGTGTGGCGTTCGATCCAAAAGACCCGCAACACACCCCCCGTGGCCTGGCAGTCGATCGTCCGGAAGTCG CAAAGTCAGTTCGCGAAGCAATGCTGGCATCGGTGGCGCAGATCAACAAGATGGGGCTCAAGGCTGATAGCCGCTGGGGTGATATCCAGGTGGTCAGCAG TGGCGGCCAGCAGACGCCGATTCACGGTGGACCTGGCACGCTGGGGGTTTATAACGCCATTCAGAGCGTACCGAGAACCGACGGTAAGCTCGAAGTCGTC AGCGGTACCAGCTATTTGCAAATAGTGACCTTCGATGACAAGGGGCCGCAGGCCCGGGGCCTGCTGGCGTTCTCGCTATCCAGTGATCCGGCCTCCCAGT ACTCCAGAGACCAGACCCTGGCATTTTCCAGGAAACAGTTGAGTGTGTTGCCGTTCACCGAGCAGCAGATCACGTCCGATCCGCAGTACCAGGTTCAGAC GATCCGCGAGCAGGATGAAAAAGCCGGGAAGGTGGCCGCACAGTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CGCTGAAGATGCTTGAACCAGGAAATGAAGGCCGCACCCCGCAAAGGGTCGCGGCCTTCAGCTTTTTGGGGCTTGTTGCGGAATGGAATTGAGGACCGGA TTGCCATCCTTGTTGCGGGTCAGGTAGACCGGCAACACCTTGGGCAGGGACGCCACCAGGTTGTTGAGCTCTTTGATGTTGTAGATGCCGCCGATACGAA TCGAGCCGGTGCTGTTGTCGGCCACCATCACCGGTTTGCTCAAGTAGCGATTGATCAATGGCAATGCGTCGGTCAGCGCCAGGTCATCGAGCACCAGTTT TCCGCTGCGCCAGGCCAGTGAGTTGTCATTGTCGTAGGTCTGACTGATCCGGGGAGTGAAATCGCCGCGTCTAAAGCTCGCCTGCATCGCTGGTTCGAGG CGCAAACCGTCACCCGTCAGGGCATCATTGCTGCTGACCAACACCGAACCTTCGATGAGGTTCACGCGTACCTGATCTTCATACATCCAGACGTTGAATT
Amino Acid Sequence
>acyl-homoserine lactone acylase subunit beta
MIISRQLTRLSLAGVLVGLSLAANARSQPEQASADIRRTSFGVPHIRADNERGLGYGIGYAYAQDNLCLLANEITTVNGERSRYFGPDQFTVEERENLVS DLFFNWLNTPQAVEGFWQTQTPAVRDLIEGYVAGYNRSLTEHRAQGLPPQCQGDWVREITIQDLVKLTRRLLVEGGVGQFAEALAGATPPKSVTHVAGDP VSFQVAASRMQRFALDRGSNAVAVGSERSFNGRGMLLANPHFPWVGGMRFYQMHLTIPGKLDVMGAALPGLPMINIGFNQHLAWTHTVDSSKHFTLYRLQ LDPKDSTRYLLDGKSLPMKKQTLTVDVKQPDGQTRPVSHVVYSSQFGPIVQWPGKLDWDNQFAYSLRDANLDNDRVLQQWYAMNRAVSLKELQASVHKIQ GIPWVNTLATDDQGQTLYMNLSVVPNVSADKLARCSDPRAGLQMIVLDGSNSACAWDIDPQAAQKGIYAADKLPQLLRKDFVQHSNDSAWMANPAQPLTG FSPLISQDGQPLGLRSRFALDRLNTLNKAGPIAAADLQHMVMDDQVYQAAQVMPDLLQFCAAALGSDAPALTPLCASLKVWDRSANLDSGLGFVHFQNVM VSLQQTPDLWRVAFDPKDPQHTPRGLAVDRPEVAKSVREAMLASVAQINKMGLKADSRWGDIQVVSSGGQQTPIHGGPGTLGVYNAIQSVPRTDGKLEVV SGTSYLQIVTFDDKGPQARGLLAFSLSSDPASQYSRDQTLAFSRKQLSVLPFTEQQITSDPQYQVQTIREQDEKAGKVAAQ
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site