Pseudomonas fluorescens C3, VC34_RS13505

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas fluorescens strain C3 FCC4LTTACXX-wHAIPI007897-94_L5_1_(paired)_contig_15, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
ATGCTCGCCTGCCGTGAACGCAGCACCTTCATCCCGATCCTCGCCAACAGCTTCGCCCGGCACACCACGGAAATTCTCGTGCCCCACGCCGAGCGCGAAC ACGGGGAATCGAAGTACAGCCCCATGCGCCTGATCAATCTGATGTTCGACCTGATCACCTGCATGACCACCACACCCCTGCGTTTGCTGAGCATCGTCGG CTTCGCCATGGCGGCCCTCGGCGTGCTGTTCGCCATTACGCTGATCGTGCTGCGCCTGGCCTTCGGCGCCCATTGGGCCGGCGACGGGACATTCGTGCTG TTCGCCGTGCTGTTCATCTTCACCGGCGGCCAGTTCATCGGCATGGGCCTGTTGGGCGAGTACCTGGGACGCATGTACGGCGATGTTCGCGCCCGCCCCC GGTTCTTTATTGAAAAAGTCCTGCGTAACCAACCCGCTGCCCCAGCTCCCGTTGTCACCGTTGACGGTCTCACCTCCATTTCTTCAGATCAGGTTCACTC
DNA Sequence for Gene
>VC34_RS13505
ATGAGTGCAAAAGCTGTTGTCTTCGCCTATCACGATATTGGCTGTGCCGGCATCGAATCCCTGCTCAACTCGGGCTTTGATATTGCCGCCGTGTTTACTC ACCCTGATGATCCGAAGGAAAACGCGTTCTACGGCTCCGTTGCGCAACTGTGCGCACGCAAGGGCATCCCGGTGCACGCCCCGGAAGATGCCAACCACCC GCTGTGGATCGAGCGCATCAGCAAACTCAACCCGGATTACCTGTTCTCGTTCTACTACCGCAACCTGTTGAGCGAGCCGCTGTTGGCCACTGCCAGCAAA GGCGCCTTCAACCTGCACGGTTCGTTGTTGCCGCGCTACCGTGGTCGTGCGCCGGCCAACTGGGTGCTGGTCAACGGTGAAACCGAAACCGGCGTCACCC TGCACCGCATGGTCAAACGGGCCGATGCCGGCGCAATCCTCGCCCAGAAAAAGGTGGCGATCGAGCGCAGCGACACGGCGCTGAGCCTGCACGGAAAATT GCGTCTGGCCGCTACCGACTTGCTGCGTGACACGCTACCGGCGTTGCTTCAGGGCAAAGTCAACGAAACCCCACAGGACGAGTCCAAAGCCACGGTCTTT GGCCGTCGCACGCCAGCCGACGGCAAACTGGTCTGGAGCAAACCGGCGGAAGAACTGTTCAATCTGGTTCGCGCCGTCACCCAGCCTTACCCGGGCGCCT TCTGCGCCGTAGGCGAACACAAGCTGATTGTCTGGAACGCAGAAGTTGCCCAAGGCAATGAAGGTCAAGCGCCTGGTCGCGTCATCAGTGTCGACCCACT GCGTATCGCCTGCGGCGAAGACTCCCTGGTGATCACCGCCGGCCAGCGCAACGACAACGGCCTGTACCTCAGTGGCCCGCAACTGGCCAACGAACTGGGT CTGGTGGACGGTTCCGTACTGCGTGGCGCCGAGTCCGGCCGCGCCCCGCGTCGCACCCGCGTGCTGATCCTCGGCGTCAATGGCTTTATCGGCAATCACC TGTCCGAGCGCCTGCTGCGCGACGACCGATACGAGGTGTATGGCCTGGACATCGGTTCGGACGCCATCGAGCGCCTGCGCAGCCATCCGAATTTCCACTT CGTCGAAGGCGACATCAGCATCCACTCCGAGTGGATCGAATACCACATCAAGAAGTGCGACGTGGTCCTGCCACTGGTGGCGATCGCCACACCGATCGAA TACACCCGCAACCCGCTGCGGGTGTTCGAGCTGGACTTTGAAGAGAACCTGAAACTGGTTCGTTACTGCGTCAAATACAACAAACGCGTGATCTTCCCGT CGACCTCGGAAGTCTATGGCATGTGCCAGGACCAGAACTTCGACGAAGACACCTCCAACCTCATCGTCGGTCCGATCAACAAACAGCGCTGGATCTACTC GATCTCCAAGCAACTGCTCGACCGGGTGATCTGGGCCTACGGCCAGAAAGGCCTGAACTTCACGTTGTTCCGTCCCTTCAACTGGATGGGCCCACGCCTC GATCGCCTGGACTCGGCGCGTATCGGCAGTTCCCGCGCGATCACCCAGCTGATCCTCAACCTGGTGGAAGGCACGCCGATTCGCCTGTTCGATGGTGGTG AGCAAAAACGCTGCTTCACCGACATTGCCGACGGCGTAGAAGCCCTGGCGCGGATCATCGACAACGACAACGACGCCTGCAACGGCCAGATCATCAACAT CGGCAACCCGGACAACGAAGCCAGCATCCGCCAGTTGGGCGAAGAGCTGCTGCGTCAGTTCGAAGCGCACCCGTTGCGCGACAACTTCCCGCCGTTCGCC GGGTTCCGCGATGTCGAAAGCAAAGCGTTCTACGGCACCGGTTATCAGGACGTGTCCCATCGCAAACCAAGCATCGCCAACGCCAAGCGCCTGCTTGACT GGACCCCAACGGTTGAAATGAGCGAGACCATCGGCAATACGCTGGATTTCTTCCTGCGTGAAGCCATGCTCGAAATCGCGGACAAGCGTTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TGCAGGCAGGTCTTCGAATCGATGTCGACACTTACCGAGGCACCCGTGAAGGGGTGCCGCGGCTGTTGGAAATCCTCGATGAAGCGCAGGTCAAGGCGAC GTTTTTCTTCAGTGTCGGGCCGGACAACATGGGGCGTCATTTATGGCGCCTGATCCGCCCGCAATTTCTCTGGAAAATGCTCCGTTCCAACGCGGCCGGC CTGTACGGCTGGGACATCTTGCTGGCCGGCACCGCGTGGCCCGGCAAACCGATCGGCCGTGATCTTGGGCATTTGATGCGTCAAACCGTGGCTGCCGGGC ATGAAGTCGGCCTGCACGCCTGGGATCACCACGGCTGGCAGGCCAATGCCGGACGCTGGAGTGACAAGCAGCTGATCGAGCACCTTCGTCGGGGCGTCGA CACCCTCGCCGACATCCTCGGGCAAAACGTCGAATGCTCGGCGTCCGCCGGGTGGCGGGCGGACGAGCGCGTGATCGAGGCCAAGCAGGCGTTCAGCTTT
Amino Acid Sequence
>UDP-4-amino-4-deoxy-L-arabinose formyltransferase
MSAKAVVFAYHDIGCAGIESLLNSGFDIAAVFTHPDDPKENAFYGSVAQLCARKGIPVHAPEDANHPLWIERISKLNPDYLFSFYYRNLLSEPLLATASK GAFNLHGSLLPRYRGRAPANWVLVNGETETGVTLHRMVKRADAGAILAQKKVAIERSDTALSLHGKLRLAATDLLRDTLPALLQGKVNETPQDESKATVF GRRTPADGKLVWSKPAEELFNLVRAVTQPYPGAFCAVGEHKLIVWNAEVAQGNEGQAPGRVISVDPLRIACGEDSLVITAGQRNDNGLYLSGPQLANELG LVDGSVLRGAESGRAPRRTRVLILGVNGFIGNHLSERLLRDDRYEVYGLDIGSDAIERLRSHPNFHFVEGDISIHSEWIEYHIKKCDVVLPLVAIATPIE YTRNPLRVFELDFEENLKLVRYCVKYNKRVIFPSTSEVYGMCQDQNFDEDTSNLIVGPINKQRWIYSISKQLLDRVIWAYGQKGLNFTLFRPFNWMGPRL DRLDSARIGSSRAITQLILNLVEGTPIRLFDGGEQKRCFTDIADGVEALARIIDNDNDACNGQIINIGNPDNEASIRQLGEELLRQFEAHPLRDNFPPFA GFRDVESKAFYGTGYQDVSHRKPSIANAKRLLDWTPTVEMSETIGNTLDFFLREAMLEIADKR
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site