Pseudomonas fluorescens C1, VC33_RS05395

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0005506 iron ion binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00607
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0009055 electron transfer activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:G3DSA:1.10.760.10
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0020037 heme binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:G3DSA:1.10.760.10
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
SUPERFAMILY SSF46626 Cytochrome c IPR036909 Cytochrome c-like domain superfamily 53 124 6.45E-17
PRINTS PR00607 Class IE cytochrome C signature IPR002323 Cytochrome c, class IE 58 69 4.9E-7
Gene3D G3DSA:1.10.760.10 - IPR036909 Cytochrome c-like domain superfamily 48 125 3.5E-27
PRINTS PR00607 Class IE cytochrome C signature IPR002323 Cytochrome c, class IE 69 79 4.9E-7
Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III IPR009056 Cytochrome c-like domain 48 122 1.9E-15
FunFam G3DSA:1.10.760.10:FF:000029 Cytochrome c5 - - 48 125 5.2E-40
PRINTS PR00607 Class IE cytochrome C signature IPR002323 Cytochrome c, class IE 112 123 4.9E-7
PRINTS PR00607 Class IE cytochrome C signature IPR002323 Cytochrome c, class IE 97 109 4.9E-7
PANTHER PTHR40942 - IPR002323 Cytochrome c, class IE 40 125 5.2E-28

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.