Pseudomonas fluorescens C1, VC33_RS28325

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas fluorescens strain C1 FCC4LTTACXX-wHAIPI007895-92_L5_1_(paired)_contig_28, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
TGTTCGTGCAGGAAGGCCGCAAGGTATTCCGCGATGTTTGCCCAATGGTTGCCGAGTTGATCGCTACGCACCTGGAAGAAAACCAGCTCAACGTCAGCGA CGTGAAGCGCTTCTGGCTGCACCAGGCCAACCTCAGCATGAACCACCTGATCGTCAAGAAACTGCTGGGTCGCGAGGCCACCGAAGAAGAAGCACCGGTG ATTCTCGACACTTACGCGAACACCAGTTCCGCCGGTTCCGTGATTGCGTTTCACAAGAACCAGGATGATCTGCCTGCCGGTTCCCTGGCGGTGCTCAGTT CGTTTGGCGCCGGTTACTCGATTGGCAGCGTGCTGCTGCGTAAGCGTTAAGCGAGAGTTTGTGTTCCTTTTCCTTGAGCTGTAATGAAATTTCCTACATT CGAAACCGTCAGGACGCTGTAACTTTCGGAAATGACAGCAGGACAACCTTTGGGTGACGTCCTGTTGTAGTCAAATTCGAGTTCAGAACAAGGAAACTGT
DNA Sequence for Gene
>VC33_RS28325
TTGATGGCGGCTGATGACACGCAATTGCTGGAACGATTGCTGGCAGGGGAACAACGCGCTTTCAAAGAGCTGGTCAGCACCTACCAGAGCGCCATGCGCG CGGTGGCGTATGCCATTGTCGGCAGTCGGCATGCCGACGAAATAGTGCAGGATGCGTGGCTGTCGGTGGTGCGCAACCTGAGCAAGTTTGAAGGGCGTTC GAGCCTCAAGACCTGGTTGCTGACCATCACCGCCAACGCGGCCAAAGGTCGCTACAAGCAAAATCGCCGCGAGGTGTTGCTTGATGATCTACCGTCACCC CACGGGACCATTGATGACGATCGTTTCTCGTCTGGCGATGGTCATTGGCTGGTGGCGCCGTTTGCCTGGCACCAGGACACCCCGGAAGCACTGCTGACCG AAAACGAGCTGCGCGAATGCCTGGAGCATACGTTGCTCAGCCTGTCGGAACTGCAACGCAGCGTATTGTCACTGCGCGAGCGTCAGGGCCTGGAGCTTGA AGAGATCTGTAATCTTTTGGAAATCTCGCTCTCCAATGTTCGCGTGCTGCTGCATCGGGCACGGTTGAAGGTATTTGCGACCGTGGAGCATTTTGAGGAG ACAGGGGAATGTTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CCTGCAAGGAACAAGTGGCACGTTCCAGCGATTATCTCGACGGTCAGTTGAGCTTTCGCGAGAAGTTGATGGTTCGCCATCATCTGATGTTCTGCCGTAA TTGCCGGCGGTTCATTCGTCAGATGCGGCTGATGCAGGCGACGTTGCGTGCCATGCCGGAAGAAACGGTACCAGACGTCGATGCACTGGCTGAACGTCTC GCTGCCGAGCGTCGCAAGGACAATCCGTAGCAGAGGATATTTATCGCGCGGATCAAGAAACAGGCTCGCGTGGATGAACCGAACGGATGATGGGGATCAA TCCATCCACGCCAGACTGTAAAAGCGGCCCGGGCTTCCTTGCCCGGGTCGTGTAGCGGGGTAAATCAGAACTTCGCTTCAGCATCCAGCTGCAGGGTGTT GATGTCGGAGTCGGTCTTCTTGATGCTGGCGTTGGTGTAGTCGGAGTTAGCCATGAAGTACGTGGCGCCGAGGTTGAAGTTCTTGTCCAACTCGTAGCTC
Amino Acid Sequence
>RNA polymerase subunit sigma-24
MMAADDTQLLERLLAGEQRAFKELVSTYQSAMRAVAYAIVGSRHADEIVQDAWLSVVRNLSKFEGRSSLKTWLLTITANAAKGRYKQNRREVLLDDLPSP HGTIDDDRFSSGDGHWLVAPFAWHQDTPEALLTENELRECLEHTLLSLSELQRSVLSLRERQGLELEEICNLLEISLSNVRVLLHRARLKVFATVEHFEE TGEC
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site