Pseudomonas fluorescens C1, VC33_RS22595
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas fluorescens strain C1 FCC4LTTACXX-wHAIPI007895-92_L5_1_(paired)_contig_18, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
TGGCCTGTTGCTCGGCCGCAGTTGCGCCGGTGCCGGTTTCAATGCCGAAGAGTGGTTGATCGATGCCGCCGAACTGCTGGAAAGCGAACCGCAGGACAAT GTCCGCAACGCCTTGATCGGCTTGCAGGATATGGTCAAGGGCGAGCTCACCGGCGACGACGTGACCGTCGTTCTGCTGCTGCCTACCGATGACGCACCGC TGGCTGATCGTGCCGTCGCACTGGGCCAATGGTGTCAGGGTTTCCTCAGCGGTTTCGGCTTGAACTGCCGCGACAGCAGCATGCTCAGCACCGAGGCCAC CGAAGTGTTGCAGGACCTGGCGGCGATTTCCCAGGTGCAAGACGCCCTGGAAGAGTCCGAAGATGGCGAAAGCGATTACATGGAAGTCATGGAATACCTG CGCGTAGCGCCGCTGCTGCTGTTCTCCGAGACCAAAAAAGACGTGCCGGCCGCTGCCAAACCGTCTTTGCATTAATCGTAAAAGGGAAAACCATCTGCCC
|
|
| DNA Sequence for Gene |
>VC33_RS22595
ATGATTCATATCCCGAAATCGGAATACAGCCGTCGCCGCAAGGCCTTGATGGCGCAGATGGAACCCAACAGCATCGCCATCCTGCCCGCCGCCGCGGTGG CCATCCGCAACCGCGACGTCGAGCACGTCTATCGTCAGGACAGCGATTTCCAGTACCTCAGCGGTTTTTCCGAGCCTCAGGCGGTCCTTGTCTTGATGCC AGGGCGTGCGCATGGCGAATACATCCTGTTCTGCCGTGAGCGCAACGCCGAGCGCGAGTTGTGGGACGGCTTGCGCGCCGGTCAGGAGGGCGCGATCCGC GACTTCGGTGCCGACGATGCCTTCCCCATCACTGACATCGACGACATCCTGCCGGGCCTGATCGAAGGCCGTGACCGGGTGTATTCGGCCATGGGCAGTA ACCCCGAATTCGATCGGCACCTGATGGACTGGATCAACGTGATCCGCTCCAAAGCGCACCTCGGTGCCCAGCCGCCGAACGAATTTGTTGCCCTGGATCA TCTGCTTCACGACATGCGCCTGTATAAATCGGCGGCAGAAGTGAAGGTGATGCGTGAAGCCGCACGGATTTCTGCCCAGGCGCATATCCGGGCGATGCAG GCCAGCCGCGCCGGGCTCCACGAGTTCAGCCTCGAAGCCGAGCTTGATTACGAGTTCCGCAAGGGCGGGGCGAAGATGCCGGCCTACGGTTCGATCGTCG CGGCGGGGCGCAACAGTTGCATCCTGCATTACCAGCAGAATGACGCCGTGCTCAAGGACGGTGACCTGGTGCTGATCGACGCCGGCTGCGAGATCGACTG TTACGCCAGCGACATCACCCGCACCTGGCCGGTCAACGGCAAGTATTCACCGGAGCAGAAGGCGATCTACGAGTTGGTGCTGGCGTCGCAAGAAGCCGCG TTTGCCGAAATCGCCCCGAACAAGCACTGGAATCAGGCGCACGAAGCCACGGTTAAAGTGATTACTGCCGGCCTGGTGAAGTTTGGCCTGCTGCAGGGTG ACGTCGACGAGTTGATCGCCAGCGAAGCCTACAAGGCGTTTTACATGCACCGCGCCGGTCACTGGCTGGGGATGGATGTGCATGATGTCGGCGAATACAA GGTCGGTGGCGAATGGCGTGTGCTGGAAGTCGGCATGGCGCTCACCGTGGAGCCGGGAATCTACATTTCCCCGGACAACCAGAACGTGGCGAAGAAATGG CGCGGCATCGGCGTGCGCATCGAGGACGACGTGGTGGTGACCAAGACCGGTTGTGAAATATTGACCAAAGGCGTACCGAAAACGGTTGCCGAGATCGAGG CCCTGATGGCGCAAGCGCGGACACAAGCAGCATGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
GCCGGGTCAATCTGGCAATCATCGGTGGCGGCCTGGTGGGCGCCAGCCTGGCGTTGGCGTTGCAGGCCGGGGCCAAGTCTCGCGGCTGGAAAATCGTCCT GATCGAGCCATTCGCCCCGGGTGATACGTACCAGCCGAGCTACGATGCTCGCTCCTCAGCGCTGTCCTACGGTGCCAAACAGATTTATCAACGGTTAGGC GTCTGGCAGGAAATTTCCCGCCGCGCCGAGCCGATCAAGCAGATTCATGTGTCCGACCGTGGACGCTTTTCCACCGCGCGTTTATCGGCAATGGAAGAGG GCGTTCCGGCACTCGGTTATGTGGTGGAAAACGCCTGGCTGGGCCAATGCCTCTGGCAAGGCCTGGACAAGGACGTGGTCACTTGGCGCTGCCCGGCGGA AGTCACCCGCATGGAACCGCTGACTGACGGCTACCGCCTGACCCTCAATGACGAAACCACCCTGGAGTGCGACCTGGCGGTGCTCGCCGATGGCGGCCGT
|
|
| Amino Acid Sequence |
>Xaa-Pro aminopeptidase
MIHIPKSEYSRRRKALMAQMEPNSIAILPAAAVAIRNRDVEHVYRQDSDFQYLSGFSEPQAVLVLMPGRAHGEYILFCRERNAERELWDGLRAGQEGAIR DFGADDAFPITDIDDILPGLIEGRDRVYSAMGSNPEFDRHLMDWINVIRSKAHLGAQPPNEFVALDHLLHDMRLYKSAAEVKVMREAARISAQAHIRAMQ ASRAGLHEFSLEAELDYEFRKGGAKMPAYGSIVAAGRNSCILHYQQNDAVLKDGDLVLIDAGCEIDCYASDITRTWPVNGKYSPEQKAIYELVLASQEAA FAEIAPNKHWNQAHEATVKVITAGLVKFGLLQGDVDELIASEAYKAFYMHRAGHWLGMDVHDVGEYKVGGEWRVLEVGMALTVEPGIYISPDNQNVAKKW RGIGVRIEDDVVVTKTGCEILTKGVPKTVAEIEALMAQARTQAA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|