Pseudomonas fluorescens C1, VC33_RS18770

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas fluorescens strain C1 FCC4LTTACXX-wHAIPI007895-92_L5_1_(paired)_contig_14, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
AAGCCCCTGTTTTCGGGCTTTTTCGAATTGGCACGCCGCTTGCTATGTCTCTGGTTACGAAAAATCAGGTCACCCGAAGGTTTCCCGACATGAGCATCAG CTTCGATAAAGCGCTCGGTATCCACGAACAAGCCCTGGGCTTCCGCGCTCAGCGTGCCGAAGTCCTGGCCAACAACATCGCCAACGCCGACACCCCGAAC TACAAGGCTCGGGATCTGGAATTCTCCAAAGTGCTCGCTGCACAGAACGAGAAAACCAAGAACGGCACCTTTGCCTTGAACATGACCAACAGCCGTCATA TCGAAGCTGAAGGCCTGGGCAATGGCGACGAGTCGCTGATGTATCGCACGCCGATGCAGCCATCGATCGACCAGAACACCGTGGACGCCCAACTGGAACA GTCGAACTACGCGGAAAACGCGGTCGGCTTCCAGGCCAGCTTCACCCTGCTCAACAGCAAATTCAAAGGGCTGGTGTCAGCCCTGCGCGGAGAGTAAGTC
DNA Sequence for Gene
>VC33_RS18770
ATGTCTCTATCCAGTGTTTTCAACATTGCCGGTAGCGGCATGAGTGCTCAAACCACTCGCTTGAACACCGTGGCCTCGAACATCGCCAACGCCGAAACCG TCTCATCGAGCATCGACCAGACCTATCGCGCCCGTCACCCGGTATTCGCCACCATGTTCCAGGGCGGCCAGAGCGGCGGCAGCAACTCGCTGTTCCAGAG CCAGGACGCTGCGGGTCAAGGCGTGCAAGTGCTGGGCGTGGTCGAAGACCAGAGCAACCTTGAAGCGCGCTACGAGCCGAACCATCCGGCTGCCGATGCC AAGGGCTACGTCTACTACCCGAACGTCAACGTCGTCGAAGAAATGGCCGACATGATTTCCGCGAGTCGTTCGTTCCAGACCAACGCTGAAATGATGAACA CCGCCAAAACCATGATGCAGAAGGTCCTGACTCTCGGTCAGTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TAAGGGGCGACTCAGATGAGTGTTATCGATACCACCAGTGGCGTGAGCCTCAAGGATGTCCTGGCCAACTCTTCGGTCAAGGCCAATAAATCCAGCAGCG ATGGCCTGGCTGCCGCAACCGGCAGCGCCACGGGCAAGAAAGCGTTGGGCAAAGACGCGTTCCTGCAGTTGCTGGTGACCCAGCTGAAAAACCAGAACCC GTTGGAGCCGCAGGACAACGGCGCGTTCGTCGCGCAGTTGGCGCAGTTCAGCAGCCTGGAAGGCATCACCACGCTGAACGATACCGTCAGCGGCATTGCC GGCAACTACAACTCCTCGCAAGCGCTGCAAGCGTCTTCGCTGGTGGGGCGTTCGGTGGTTGCCCAGACCGATACCGCAGTGGTCGATACCTCCAAGAGTT TCAACGGTACGGCGGTCGTACCGGCTTCGACGAATCCGGTGACGATCAAGATCACGGATACCGATGGCAAAGTCGTTCGCACCATCGATCTTGGCAGCCA
Amino Acid Sequence
>flagellar basal body rod protein FlgC
MSLSSVFNIAGSGMSAQTTRLNTVASNIANAETVSSSIDQTYRARHPVFATMFQGGQSGGSNSLFQSQDAAGQGVQVLGVVEDQSNLEARYEPNHPAADA KGYVYYPNVNVVEEMADMISASRSFQTNAEMMNTAKTMMQKVLTLGQ
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site