Pseudomonas fluorescens C1, VC33_RS15880

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas fluorescens strain C1 FCC4LTTACXX-wHAIPI007895-92_L5_1_(paired)_contig_12, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CAGCAAGCGGGCGGCATCGAATGCTACCCGGTGACCGGCGAGATCACGTACGGTCTGGAGCGTCTGGCCATGTACCTGCAAGGCGTGGACTCGGTCTACG ACCTGGTCTGGGCTGACGGTCCGTTCGGCAAAGTGACCTACGGCGACGTGTTCCACCAGAACGAAGTGGAGCAGTCCACTTACAACTTCGAACACGCCAA CGTCGAGAAACTGTTCGAACTGTTCGATTTCTACGAAAGCGAAGCCAAGCGCCTGATCGAACTCGACCAGCCGCTGCCGTTGCCGAGCTACGAAATGGTG TTGAAGGCCTCCCATACCTTCAACCTGCTGGATGCACGCCGGGCGATCTCGGTGACCGCGCGTCAGCAATACATTCTGCGAGTACGCACCCTGGCGCGTT CCGTTGCGCAAGCCTACCTGCTGGCTCGCGCCAAGCTGGGCTTCCCGATGGCGACCCCGGACCTGCGTGACGAAGTACTGGCCAAGCTGGAGGCTGCACA
DNA Sequence for Gene
>VC33_RS15880
ATGAGTGCTCTGGATTTTCTGGTTGAACTGGGCACTGAAGAACTGCCACCCAAAGCCCTGAACACCCTGGCCGAGGCGTTCCTCGCCGGTATCGACAAGG GCCTGCAAGCCGCCGGTCTGAACTACGAGACCAAAACCGTCTACGCCGCGCCGCGTCGCCTGGCCGTGCTGATCACGTCGCTGGCCACCCAGCAACCGGA TCGCAGCATCAACCTCGATGGCCCGCCACGTCAGGCGGCGTTCGATGCCGAAGGCAACCCGACCCAGGCAGCACTGGGTTTTGCCAAGAAGTGCGGTGTC GAGCTGAGCGAAATCGATCAGAGCGGTCCGAAACTGCGTTACAGCCAAAGCATCGCCGGCAAGCCGACCGCGAGCCTGCTGCCGACCATCGTCGAAGATT CGCTGAACGACCTGCCGATCCCGAAACGCATGCGTTGGGGCGCTCGCAAGGAAGAATTCGTTCGTCCGACCCAATGGCTGGTGATGCTGCTCGGTGACGA AGTCATCGATTGCACCATCCTCGCCCAGAAGGCTGGCCGCGATTCCCGTGGCCACCGCTTCCATCACCCGGAAAATGTACGCATCACCTCGCCGGCCAAT TACCTGGCCGACTTGCGTGCCGCTTACGTCCTGGCCGATGCCAACGAGCGTCGCGAGATCATCAGCAAGCGCACCGAAGAACTGGCCACCCGTCAGGAAG GCACGGCGATTGTTCCGCCGGCGCTGCTCGACGAAGTGACCGCGCTGGTCGAATGGCCGGTGCCGCTGGTGTGCTCGTTCGAGGAACGTTTCCTCGACGT GCCGCAAGAAGCGCTGATCACCACCATGCAGGACAACCAGAAGTATTTCTGCCTGCTGGATGCCGACGGCAAGTTGCTGCCACGTTTCATTACCGTGGCC AACATCGAAAGCAAAGACCCGCAGCAGATCATCGCCGGTAACGAGAAAGTGGTTCGCCCACGACTGACCGACGCCGAGTTCTTCTTCAAGCAAGACAAGA AGCAGAAGCTCGAAGACTTCAACCTGCGCCTGCAAAACGTGGTGTTCCAGGAAAAACTCGGCAGCGTCTACGACAAGGCCGAGCGTGTTTCCAAACTCGC TGCGTTCATCGCGCAACGCATTGGCGGCAACGCAGCCTGGGCGTCCCGCGCCGGCCTGCTGTCCAAGTGCGACCTGTCGACGGAGATGGTCGGTGAGTTC CCGGAGATGCAAGGTGTCGCCGGTTACTACTACGCCCTCAACGACGGCGAGCCGGAAGAAGTCGCCCTCGCGCTGAACGAGCAGTACATGCCGCGCGGTG CCGGTGCTGAACTGCCGACCACCCTGACCGGTGCGGCCGTGGCCATCGCGGACAAGCTCGACACGCTGGTGGGTATCTTCGGTATCGGCATGTTGCCAAC CGGCAGCAAAGACCCGTATGCCCTGCGCCGTGCAGCGCTGGGTGTGTTGCGCATCCTGATCGACAAGAAGCTCGAACTCGACCTGACCGACGCCGTGGCC TTTGCCGTCGATGCGTTCGGTGCCAAGGTCAAGGCTGCTGGCCTGAATGACGCGGTGCTGGAATTCATCTTCGACCGCCTGCGTGCCCGTTACGAAGACG AAGGCGTCGACGTCGCGACTTACCTGTCGGTTCGTGCCCTGAAGCCGGGCTCGGCGCTGGATTTCGACCAGCGTGTGCAAGCGGTGGAAGCCTTCCGCAA ACTGCCGGAAGCCGCCGCCCTGGCCGCAGTGAACAAGCGTGTGTCGAACTTGCTGAGCAAGGTCGAAGGTTCTGTTCCGACCGTAGTTGAAGCGAAATAC TTCGATAACGCCAACGAGTTCTCCCTGTACTCGGCGATCCAGCAGGCGGACCAGGCTGTTCAGCCGATGGCCGCGGCCCGTCAGTACAGCGAATCGCTGG CACGCCTGGCCGCATTGCGCGAGCCGGTGGATGCCTTCTTCGAAGCAGTGATGGTCAACGCGGAAGATGCCAAGGTGCGCGCCAACCGTTATGCGTTGCT GGCACGTCTGCGCGGTCTGTTCCTGGGCGTCGCTGATATCTCGCTGCTGAGCTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GGGGCTGCTGTTGAAACTGCTGATTCTCGATCGCGACGGGGTGATCAATTACGACTCCGACGCTTACATCAAGTCGGTGGAGGAGTGGATTCCACTTCCC GGTTCGATCGAAGCCATCGCGCAGTTGAGCAAGGCCGGCTGGACGGTAGCCGTCGCTACCAACCAGTCGGGCATCGCTCGCGGCTATTACGACATTGCCA CCCTGGACGCCATGCACGAGCGCTTGCGCTCATTGGTGGCGGAGCAGGGCGGTGAAGTCGGGCTGATCGTCTACTGCCCGCACGGGCCGGACGAAGGCTG CGATTGCCGCAAGCCGAAACCCGGGATGTTGAAAACCATCGCCGGGCATTACAACGTGTCGCTGACCAATCTCTGGTTCGTCGGCGACAGCCTTGGTGAC CTGGAAGCCGCCAAAGCCGTCGATTCACAACCAGTTTTGGTAAAGACCGGGAAAGGCGAAAAGACTCTGGGCAAGTCCCTACCGGTGGGCACCTTGATTT
Amino Acid Sequence
>glycine-tRNA synthetase subunit beta
MSALDFLVELGTEELPPKALNTLAEAFLAGIDKGLQAAGLNYETKTVYAAPRRLAVLITSLATQQPDRSINLDGPPRQAAFDAEGNPTQAALGFAKKCGV ELSEIDQSGPKLRYSQSIAGKPTASLLPTIVEDSLNDLPIPKRMRWGARKEEFVRPTQWLVMLLGDEVIDCTILAQKAGRDSRGHRFHHPENVRITSPAN YLADLRAAYVLADANERREIISKRTEELATRQEGTAIVPPALLDEVTALVEWPVPLVCSFEERFLDVPQEALITTMQDNQKYFCLLDADGKLLPRFITVA NIESKDPQQIIAGNEKVVRPRLTDAEFFFKQDKKQKLEDFNLRLQNVVFQEKLGSVYDKAERVSKLAAFIAQRIGGNAAWASRAGLLSKCDLSTEMVGEF PEMQGVAGYYYALNDGEPEEVALALNEQYMPRGAGAELPTTLTGAAVAIADKLDTLVGIFGIGMLPTGSKDPYALRRAALGVLRILIDKKLELDLTDAVA FAVDAFGAKVKAAGLNDAVLEFIFDRLRARYEDEGVDVATYLSVRALKPGSALDFDQRVQAVEAFRKLPEAAALAAVNKRVSNLLSKVEGSVPTVVEAKY FDNANEFSLYSAIQQADQAVQPMAAARQYSESLARLAALREPVDAFFEAVMVNAEDAKVRANRYALLARLRGLFLGVADISLLS
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site