Strain | Pseudomonas fluorescens PICF7, complete genome. [Details] | |
DNA Sequence Upstream of Gene |
TCAACTTCACCCGGCGGTCGGCGCACAGAATAAGTTGCTGGAAAATGTCTGGCCGACGCTAAAACCGCTGTTATGACGCTTTTCTACCGGCAGGCTTTCG GCTAAGGTGGCGCCCCCCCGATTTGGAGCCCCCGATGTCGCGTCCTGCCTGGTCCCTGTTTAACTACCAACTGATCGAGCCGGACGAGCAGCTGGACCTG TTCGCCTGTCAGGAAGTGCGGGTGCATCTGGTGGCGCGTCAACTGGAGCTGGGGGGCTCCATCGATCGCACACTCTGCGGCACGCTCTTGCCTGCGCAAC CGCGCTGGTCGCGGGTGGATCGTTCGATTTTCCAGGACCAGCGCCTGTGCCCTTTGTGCCGTGCGATCCTGGAGTCCCAGAAGCGGGGTACGCCGCCGAT CTGGCCGGAGCTGCGTTTCGAGTTGTAGGGGGCAGCTAGAAGCGCGCTTCACGTATACAATCGATGTTTACCTACCCGTCGTCTGCGAAGGATTTACCGG
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DNA Sequence for Gene |
>PFLUOLIPICF7_RS28050
ATGTTGTCGCGCCTTTCCGTCGTCACCTGCTGCCTGTCTCTCGCTGCACTCTGTGCGGCCGGTTCTGCGTCAGCCCTGCAGTTGCCCTTGCCACCGCCGG GTGAAGACATCGTCGGCCAGGTCCAGGTGATCAAGGCCAAGTACGAAGACACCTTTGCCGACCTGGGCACCACCTATGACCTGGGTTACTCGGAGATGGT CGCCGCCAACCCCGGCGTGGATGCATGGTTGCCGGGCGCGGGCACCGAGATCGTGCTGCCGACGCGCTTCATCCTGCCGCCGGGCCCGCGCGAAGGCATC GTGATCAATCTGGCGGAATACCGACTCTACTACTTCCCCAAGGGCCAGAACGTGGTCTACACGTTCCCGTTGGGGATCGGTCGTGAAGGCTGGGGTTCTC CTATTGCCCACACCAGCATCATCGCCAAGACACCCAACCCGACCTGGACGCCGCCCGCGTCGATCAAGGCCGAGCACGCCGCCAATGGTGACCCGCTGCC CAACGTGGTGCCGGCCGGCCCGGACAATCCGCTGGGTCCGTTCAAGTTCACCCTGGGCACGCCGGGTTACCTGATCCACGGTTCCAACATGAAATTTGGT ATCGGCACGCGTACAAGTCACGGCTGCTTCCGTATGTTCAACAACAACGTGTTGGAGATGGCGGGCATGGTGCCGGTGGGGACGTCGGTGCGCATCATCA ACGATGCCTATAAATTCGGTCGCAGTGGTGGCAAGGTCTACCTGGAAGCACATACGCCGTTGAATGATGACGGGACGCCGTCGGTGGTCGACAAACACAC CGCTGTCATCAACGCCTTGCTCAAGCGTGAAGACTTGGCCAATCAATTGCGGGTGAACTGGGACCAGGTGCGCGATGTGGTCGCGGCGGAAGATGGTTTG CCGACGGAGATCGGCGAGCCTGGCGCGGCCTCGGTCGCCGTGAGCGCGCCGATCGACCTGCAGCAATAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GTCGCTCGATCATAAGCCCGCCACGGTCTTGCGCCGGGGCGGGCTTTTTATTGCCCGAGATTGAGGTACACACCCCAGGCAATAAAAAAGCCGACCCATA AATGGATCGGCTTGATAACAACCCCGAGGGATTATTACTTGCGGCTAGCTTTTTCAAGCATACGCAGAGCGCGCTCGTTAGCTTCGTCAGCAGTCTGTTG TGCTTTTTGAGCAGCAGCCAGAGCTTCATCAGCTTTACGGTAGGCTTCGTCTGCACGGGCCTGGGAGCGAGCTGCTGCGTCTTCAGTTGCAGTCAGACGA GCTTCGGTTTCTTTGGAGACGCTGCTGCAACCGGTAGCCAGAACTGCGGCCAGAGCCAGAGCAGAGAATTTCAGAACGTTGTTCATCGTGTTCCCCTTCA AGGACTTTCTATTAGATAGCTAGTTCGCCCAGAGTGAGCTAATAGCCGGCGTACATACTACCCATTACTTGTAGTAAGTAAACTGACGTAGCGCAAGAAG
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Amino Acid Sequence |
>hypothetical protein
MLSRLSVVTCCLSLAALCAAGSASALQLPLPPPGEDIVGQVQVIKAKYEDTFADLGTTYDLGYSEMVAANPGVDAWLPGAGTEIVLPTRFILPPGPREGI VINLAEYRLYYFPKGQNVVYTFPLGIGREGWGSPIAHTSIIAKTPNPTWTPPASIKAEHAANGDPLPNVVPAGPDNPLGPFKFTLGTPGYLIHGSNMKFG IGTRTSHGCFRMFNNNVLEMAGMVPVGTSVRIINDAYKFGRSGGKVYLEAHTPLNDDGTPSVVDKHTAVINALLKREDLANQLRVNWDQVRDVVAAEDGL PTEIGEPGAASVAVSAPIDLQQ
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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