Strain | Pseudomonas fluorescens PICF7, complete genome. [Details] | |
DNA Sequence Upstream of Gene |
TTATGAATGTTTGCTCCGCCGAGGACATGTAATGGCTACCGAACACGAAAACACTTCCGCCGAAGACCAGGCCCTGGCTGACGAATGGGCGGCAGCCTTG GAAGAAACCGGCGATGTCGGCCAGGACGACATTGACGCGCTGCTGGCCGCTGACGCCGCCACCGCGCCGGCCGGCAACCGCCTGCCGATGGAAGAATTCG GCAGCGTGCCGAAAAACAACGAACCGGTGACCCTCGACGGCCCGAACCTGGATGTGATCCTCGACATCCCGGTGTCGATCTCCATGGAAGTCGGCAGCAC CGAAATCAACATTCGCAACCTGCTGCAACTCAACCAGGGCTCGGTGATCGAGTTGGACCGCCTGGCCGGCGAACCGCTGGACGTGCTGGTCAACGGCACC CTGATTGCCCACGGAGAAGTGGTGGTGGTCAACGAGAAGTTCGGCATCCGCCTGACCGACGTGATCAGCCCGAGCGAACGCATCAAGAAGTTGCGCTGAT
|
|
DNA Sequence for Gene |
>PFLUOLIPICF7_RS16470
ATGAAGTATTCGATGGCGGGACTGTTTCTGGCGCTGCCATTGAGCGCCCTGGCGGCTGAACCGGCCGCGCACGCGACCGCCGCGGCTGCGCCGGTGGTAA GCAGCGGTATCGGCGGGCAATTGACCCAGTTGGTGCTGGGCCTGTTGCTGGTGGTGGGTTTGATCTTCGCACTGGCGTGGTTGCTGCGCCGCGTGCAGCG CGTGGGGCCGGGCAACGGCCAGGTGATCGAGATGATCGGTTCCCGCGCCCTCGGCCCGCGTGATCGGCTGGTGCTGGTGCAAGTGGGCGAGGAGCAGATC CTGCTGGGCATCACGCCCGGTCGCATTACCCCGCTGCATGTGCTCAAGACCCCGGTGAGCGTGGATCAGAACCCGCCCGCCACGCCAGAATTCGCCCAGC GCCTGATGGAATTGCTGGGCAAGGATCAGAAGGATAAGAAGTAA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
DNA Sequence Downstream of Gene |
TGCGCGTTTTATTGACGCTCATGCTGTTGCTGGCGGCGCCATTGGCGTTTGGCGCCGACCCGTTGTCGATCCCGGCGATTACGCTGGGGACCAACGCGAC CGGCGCGCAGGAATACTCGGTCAGCCTGCAGATCCTGCTGATCATGACGGCGCTGAGCTTTATCCCGGCGTTCGTCATGCTGATGACCAGCTTCACGCGA ATCATCATCGTGTTCTCGATCCTGCGCCAGGCCCTGGGCCTGCAGCAGACGCCGTCGAACCAGATCCTCACCGGCATGGCCCTGTTCCTGACGCTGTTCA TCATGGCGCCGGTGTTCGACAAGGTGAACCAGCAAGCCCTGCAACCTTACCTGGCGGAAAAAATGACCGCCCAGGACGCAATCGACAAGGCCCAGGGCCC GATCAAGGACTTTATGCTGTCGCAGACCCGCTCCAGCGACCTTGAACTGTTCATGCGCCTGTCCAAGCGGACCGACATCGCTACGCCGGATCAGGCGCCG
|
|
Amino Acid Sequence |
>flagellar assembly protein FliO
MKYSMAGLFLALPLSALAAEPAAHATAAAAPVVSSGIGGQLTQLVLGLLLVVGLIFALAWLLRRVQRVGPGNGQVIEMIGSRALGPRDRLVLVQVGEEQI LLGITPGRITPLHVLKTPVSVDQNPPATPEFAQRLMELLGKDQKDKK
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|