Pseudomonas fluorescens PICF7, PFLUOLIPICF7_RS16465 (fliN)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas fluorescens PICF7, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
GGAAGTCAATTTCGAGTACATCAACTCGGAAGTGAACCCGGCCATGGCCAACATCGTCGGACCCAGCGAAGCCATCGTGGTGTCGACCTTCCACATCGAA CTCGATGGCGGTGGCGGCGACCTGCACGTGACCATGCCTTACTCGATGATCGAGCCGGTGCGCGAGATGCTCGACGCCGGTTTCCAGTCCGACCTGGACG ACCAGGACGAACGCTGGGTCAAGGCTCTGCGCGAAGACCTGCTGGACGTCGACGTTCCACTGAGCGCCACCGTGGCCCGTCGCCAATTGCGCCTGCGCGA TATTTTGCACATGCAGCCGGGGGACATCATCCCCGTCGAATTGCCGGAAGAAATGATCATGCGCGCCAACGGCGTGCCGTCGTTCAAGGTCAAGCTCGGT TCCCACAAGGGCAACCTGGCACTGCAAGTGGTCGAGCCGATCAACCGTCGCTGATTCGCCCTAATTAATTTATGAATGTTTGCTCCGCCGAGGACATGTA
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| DNA Sequence for Gene |
>PFLUOLIPICF7_RS16465
|fliN
ATGGCTACCGAACACGAAAACACTTCCGCCGAAGACCAGGCCCTGGCTGACGAATGGGCGGCAGCCTTGGAAGAAACCGGCGATGTCGGCCAGGACGACA TTGACGCGCTGCTGGCCGCTGACGCCGCCACCGCGCCGGCCGGCAACCGCCTGCCGATGGAAGAATTCGGCAGCGTGCCGAAAAACAACGAACCGGTGAC CCTCGACGGCCCGAACCTGGATGTGATCCTCGACATCCCGGTGTCGATCTCCATGGAAGTCGGCAGCACCGAAATCAACATTCGCAACCTGCTGCAACTC AACCAGGGCTCGGTGATCGAGTTGGACCGCCTGGCCGGCGAACCGCTGGACGTGCTGGTCAACGGCACCCTGATTGCCCACGGAGAAGTGGTGGTGGTCA ACGAGAAGTTCGGCATCCGCCTGACCGACGTGATCAGCCCGAGCGAACGCATCAAGAAGTTGCGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TATGAAGTATTCGATGGCGGGACTGTTTCTGGCGCTGCCATTGAGCGCCCTGGCGGCTGAACCGGCCGCGCACGCGACCGCCGCGGCTGCGCCGGTGGTA AGCAGCGGTATCGGCGGGCAATTGACCCAGTTGGTGCTGGGCCTGTTGCTGGTGGTGGGTTTGATCTTCGCACTGGCGTGGTTGCTGCGCCGCGTGCAGC GCGTGGGGCCGGGCAACGGCCAGGTGATCGAGATGATCGGTTCCCGCGCCCTCGGCCCGCGTGATCGGCTGGTGCTGGTGCAAGTGGGCGAGGAGCAGAT CCTGCTGGGCATCACGCCCGGTCGCATTACCCCGCTGCATGTGCTCAAGACCCCGGTGAGCGTGGATCAGAACCCGCCCGCCACGCCAGAATTCGCCCAG CGCCTGATGGAATTGCTGGGCAAGGATCAGAAGGATAAGAAGTAATGCGCGTTTTATTGACGCTCATGCTGTTGCTGGCGGCGCCATTGGCGTTTGGCGC
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| Amino Acid Sequence |
>flagellar motor switch protein FliN
MATEHENTSAEDQALADEWAAALEETGDVGQDDIDALLAADAATAPAGNRLPMEEFGSVPKNNEPVTLDGPNLDVILDIPVSISMEVGSTEINIRNLLQL NQGSVIELDRLAGEPLDVLVNGTLIAHGEVVVVNEKFGIRLTDVISPSERIKKLR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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