Pseudomonas fluorescens PICF7, PFLUOLIPICF7_RS10080
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas fluorescens PICF7, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
GGAGCAGACCACTACCGAGGTGGTGCGCGGTGCGCGGCTGGCCCAGGACGCCGGGGTGGCGCTGGAAGAGATCGAAGGCGTGTCGAAAACCCTGGCGGCG CTGATCCAGAGCATCTCCAACGCGGCGCAGCAACAGACCTCGTCGGCGGGGCAGATTTCCCTGACGATGAATGTGATCCAGCAGATCACCACCCAGACCT CGTCGGGCTCCACGGCGACGGCTGAAAGCATTGGCAACCTGGCGAAAATGGCCAGCCAGTTGCGGCGCTCGGTGTCGGGCTTCACCTTGCCACCGCCCAA GCAGGTCAATGATTGAAATGCTATCTGAAGAACACCACAGTCCAACTGTGGGAGCTGGCTTGCCTGCGATAGCGGTCTGTCAGATACAGATGTGTTGCTG ACCCACCGCTATCGCAGGCAAGCCAGCTCCCACATTTGATCTCCACCAGTCGGGAGATCTTGGCAACATCAGCAACCCACGAATTCTAAGCGGAGCAGTT
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| DNA Sequence for Gene |
>PFLUOLIPICF7_RS10080
ATGGTTGATCGGCACGACTACGTGGCCCTCGAATGGGTCAAGGGCGACATTGCCGAAACCCTGAAACAGGCCCGTTCGGCGCTGGACGCGTATGTCGAAA CCAGCGACGGCGACGCCATCAGCGAGTGCCTGGCCGCTGTCCACCAAGTGCATGGCGCGTTGCAAATGGTCGAGTTCTACGGCGCAGCCTTGCTCGTCGA GGAAATCGAAGCACTGGCCCTGGCCCTGCAAGCCGCAGGCGTGAGCCAGCGCGATGAAAGCATCCGCCTGCTGCAACAGGCCCTCAACCAGTTGCCGCTG TACCTGGACCGCGTGCACAGCGCCCGCCGCGACCTGCCGCTGGTGGTGTTGCCGCTGCTCAATGACCTGCGCAGCGCGCGCGGCGAAAGCCTGCTGTCGG AGACCAGCCTGTTCAGCCCGCAACTGCTGACGATAGCGCCGCTGCCCGACGAGGCCCTGGCCCAACGCGCGGTGCCCGACCTGAAAGAGCAACTGCGCCA GTGGCATCAACTGCTGCAACAGGCCCTTGCCGGGCTGCTGCGCGAAGATCATGGGCCCAGCAACCTGGAAGACATGGCGCGGGTGTTCGCGCGCCTTGAA ACGCTGTGCCAAGGCGCGCCGCTGTTGCCGCTGTGGCAAGTCACCTCGGCACTGGTCGAAGGCATGCTCACTGGCGTGATCGCCAACAGCCCGGCGCTGC GCAGCCTGCTCAAGGCCAGCGACAAACAACTCAAGCGTCTGCTGGCCCAGGGCATCGGCGGGATCAACCAGCCGGCACCGGATGAGCTGCTCAAGAGCCT GCTGTTCTATGTCGCCAAGGTCACCCGGCCGACGCCGCGCATGCAAAGCCTGAAAGAGCGCTACGGCCTGGATGAAGCCTTGCCCGACAGTGCGTTAGTC GACGCCGAACGCGCCCGCCTGGCCGGGCCGGACCGCAACGCCATGGGCTCGGTGCTGGGGGCCTTGTGTGAAGAGCTGGTGCGGGTCAAGGAACGCCTCG ATTTGTTCGTACGCAGTGACCGCCAGCACACCAGCGACCTCGATGCGTTGCTCGCGCCGCTGCGGCAGATCGCCGATACCCTGGCGGTGCTGGGCTTCGG CCAGCCGCGTAAAGTCATCATCGACCAACTCGCCGTGGTGTTGAGCCTGGTTCAAGGCCAACGCGAACCCAACGACGCAGTGCTGGTGGACGTCGCCGGC GCGTTGCTCTACGTCGAAGCCACACTGGCGGGCATGGTCGGTACCGTCGAGCCGGAAAGCCGCGAAGAAAACCGCCTGCCCACCACCGACCTGACCCAGA TCCATCAGTTGGTGATCCGTGAATCCTGCCAGTGCCTCAAGCAAGCCAAGGAGCTGGTGATCGACTGCATTGAAGCCGACTGGGACCGCCAACGCCTGGA GTCCCTGCCGGAGCTGCTGAGCCAGGTGCGCGGCGCTTTGGCGATGATTCCGTTGCCCCGCGCGGCAAGCCTGATGCGCGGCTGCACGGATTATGTTGAT GAACAGTTGATGGGTAACGACGCACCACCCTCCGAGGGGCAACTGGCGCATTTCGCCGACGTGATCAGCAGCCTGGAATACTACCTCGAACGGATGCTCC AAGACCCCGATGCCGCAGGGGAACGGGTGCTGGAGCTGGCCACGCACGGCCTGGCGGCGCTGGGTTACCTGCCTGCCGAGAAACCCTGGCGCCAAGCCCT GGTTGCACCGGACGGAGCACGTGCGGTGGAGGTTACGCCGAGCCAGTCGCAGTTCGACGCGCTGGCCAGTCCCACGTCGCGCCTTAACCCGCCCGCCCTC CAGCGCCCCGGCAGCCTGCTGCCGCCGCCGGCCGATGAAGAACCCATCGACGATGAACTGCGCGAGGTCTTCCTTGAAGAGACCGACGAAGTGCTTGAGG TGCTGCACCGCAATCTACCTAACAGCGCGGACAAAATCGCCCAGGGCGAAATGCGCCGTGTCTTCCACACGCTCAAGGGCAGCGGCCGCATGGTCCGCGC CCTGGTCTTGGCCGAGCTGGCCTGGGCGGTGGAGAACCTGCTGAACCGTGTGCTCGAGCGTAGCGTGACCCTTGGCCCCGACGTGCAGCAGGTACTGGAT GAAGCGGTGGCCTTGCTGCCTGAGTTGATCGCTGACTTTGCCATCGACGACCAGCGCCAAAGGGATGAGGTCGACGCCCTGGCCGCCCGCGCCCACGCCT TGGCCAGCGGCATGCCGGTGCCGGCCGCCGAGCCTCATGACCCGATGCTGCTGGAGATCTTCCGCAACGAAGCCCAGAGCCATCTGGACAGCCTCAATCA CTTCCTGCACCAGGCCGCCGAGCACGTGCCATTGCAAGTCAGCGATGAACTGCAACGCGCCCTGCATACCCTCAAGGGCAGCGCCTACATGGCGGGCGTG TTGCCGATCGCCGAGCTGGCCCGCCCGCTCGACCACCTGACCCGTGAATACAAGGCCCACCGCCTGCCGCTGGACCTGGACGAGGTGGAGTTGCTGTTGG AAGCCGAAGGTCTGTTTCAACGGGGTTTACGCGATCTGGACAGCGATCCCCTGGCGCCGATCAAAGGTGCAGAGGACTTGATCAACCGTACCCAAAGCCT ACTGGATCATCAGCTTGAAGCGCTGCTCGACGTGCGCATCAAGCGCGACCCTCAGCTGATCGCCAACTTCCTCGCGCAGGGCATGGACATCCTGCTCGAT GCCGAAAACCTGCTGCGTCGCTGGCAGCAACACCCCGGCGAGCGCCAGGAACTCACCGCGCTGCTGGACGAACTGACCACCTTGGGGGAGGGCGCACACG TCGCTGACCTGCACGCCATCGATGCACTCTGTGAAGCCTTGCTCGACCTGTATGGCGCTGTTGAGGAAAGCAGCCTGGCCGTCAGTGAGCGGTTTTTCCA TGAGGCCGAACAGGCCCATGAAGCGCTGATCAGCATGCTCGACCAACTGGCCGCCGGCCAGGAAATCAGCCCGGCGCCAGCCCGCGTCGAAGCCCTGCGC GAGCTGCTGGATGAAGCCCTCGACCCGTCCGCCACCGGCCTGATCAAAAGCGACGGCAGCCGGGTGTTGAGTGTTTCCGAACTGGGCGCCGCCACACAGC AGTTGGATCACGAAACGGAGAGGGACAACGAGATCGTCGAGATCTTCCTCGAAGAAGCCGTGGACATCCTCGACAGCGCCGGGCAGTCGCTCAAGCGCTG GTTGCTGGAGCCCGACAACGCCGCACCGCTGTCGTCGCTGCAACGCGACCTGCACACCCTCAAGGGCGGTGCGCGCATGGCTGAAATCGAGGCCATTGGC GACTTGGCCCATGAGTTGGAATGCCTGTACGAAGGGCTGGTGGACCGCCGCTACAGCTACACTGCCGAACTGTCCCACGTGCTGATGGCGAGCCATGAAC GCCTCGCCTTGCAGCTTGAAGAACTGCACCATCACCAGCCGCTGAGCGACAGTGCCGAACTGATCGCCAGGGTGCGGGCGTTGCGCCAGGGCAGCGCGCC AGCGGCACCGGCCGCCGCACCGCCAGCGTCCGGCGCCGACCCTGAGCTGCTGGATATCTTCCTCGAAGAAGCCGCCGACATCCTCGACAGTTCCAGTGCT GCGCTGTCGCGCTGGCAGGCAGAGCCGGGCAATCGCCAAGAAGTGGAAACCCTGCTGCGCGACCTGCATACCCTCAAGGGCGGCGCACGTATGGTCGAGA TCGCGCCCATCGGCGACCTGGCCCATGAGCTGGAGTTTCTCTACGAAGGCCTGTCCGCTGGTTTGCTCGCGCCGTCCCCGGAGCTGTTCGCGTTGCTGCA AGGCTGCCACGACCGTTTGGCGCAGATGATCGACGCGGTGGCGGATGGTTTGCCGGTCGGTTCGGTGGACAAGCTCATCGAGCGCATCAAAACCCTGGTA CATCCGAGCGACGAACCGGTGACGCCGGTGGCGCTGCCTGCAGGCAAGGCGGAGGCCGTCGTCGACCCGATGGCCGATATGGTGAAGATCTCTGCCGAGC TGCTCGACGACCTGGTCAACCTGGCCGGTGAAACCTCGATCTTCCGTGGCCGCATCGAACAACAAGTCAACGACGCACGCATCGCCCTCACCGAAGTGGA AACCACCATCGAGCGCATGCGCGACCAACTGCGACGTCTCGACACTGAAACCCAGGGCCGCATCCTCAGCCGCCAGCAAGCCGAAGCCGAGCGCCTGGGC TATGAAGACTTTGATCCGCTGGAAATGGACCGTCATTCGCAGTTGCAGCAACTGTCTCGCGCGCTGTCCGAGTCCGCCTCCGACCTGCTCGACCTCAAGG ACACCCTTGAGCGCCGCAACGAGGACGCCCACGACCTGTTGCAGCAACAGGCGCGCATCAACACCGAGTTGCAGGAAGGCCTGATGCGCACGCGCATGGT GCCGTTCGAACGCATGTTGCCGCGCCTCAAGCGCATCGTGCGTCAGGTGGCGGAGGAGTTGGGCAAAGACGTGGAGTTTATCGTCGGCAACGCCGAGGGG GAGATGGACCGCAACGTGCTGGAGCGCATGGCCGCGCCGCTGGAACACATGCTGCGCAACGCCGTGGACCATGGCTTGGAATCCCGCGACGCAAGGCTGT TGGCTGGTAAGCCGGAAAAAGGTCGCATCACCCTGGACCTGACCCACGAAGGCGGCGACATCGTCTTCGACATGCGTGACGACGGCGCCGGCGTTCCGCT GGAGGCCGTGCGGCGCAAGGCGATCAAGCGTGGGTTGCTCGACCCGAATCAAGACATCAGCGACCGCGACGTGTTGCAGTTCATCCTGCAACCGGGGTTT TCCACGGCGGAAAAGATCACGCAGATTTCCGGTCGCGGCGTGGGCATGGACGTGGTGCATGAGGAAGTGCGTCAGTTGGGCGGCTCGATGGTCATCGATT CGACGCCGGGCGAAGGCGTGCACTTTCGCATTCGCTTGCCGTTCACCGTGTCGGTCAACCGCGCATTGATGGTGCAGTGTGCAGACGAGCAATACGCGAT TCCGCTCAACACCATCGAAGGCCTGGTGCGCGTGCTGCCCCATGAGCTGGCCGGGCACTATCAGCAAGACCCGCCGCGATATGAATACGCCGGGCAGCGC TACGAGCTGTTTTACTTGGGCGACCTGCTGCACACCGTCAGCCGCCCGAAACTGCTGGGCCACTATCAACCGGTCCCGGTGCTATTGGTGCAGTGCAACG AGCGGCGCGTGGCCATCCATGTGGACGCCATGGCCGGTACGCGGGAGATTGTGGTCAAAGGCCTGGGCCCGCAGTTTGCCGGTGTGCAGGGTTTGTCGGG TGCGACGATCCTGGGTGATGGCCGCGTGGTGCTGATTATCGACTTGCTGGCGCATATCCGTGCGCGGCAACCCGCGTTGCCGGCGCAAACGGCTGACCTG CCATTGATCCTCAACGACCCGCTGAAAAAGCGCCCGTTGCTGGTGCTGGTAGTGGATGATTCCGTCACCGTGCGCAAAGTCACCAGCCGTCTGCTGGAGC GCAACGGCATGAACGTCCTCACCGCCAAAGACGGCATCGACGCGCTCGCTGTGCTCGAAGAACACACCCCGGACCTGATGCTGCTCGACATCGAAATGCC GCGCATGGACGGTTTTGAAGTCGCCACCCAAGTGCGCAACGACCCCCGGTTGATGCGCCTGCCGATCATCATGATCACCTCGCGCACCGGCCAGAAACAC CGCGACCGCGCCATGGCCATCGGCGTCAACGACTACCTCGGCAAGCCGTACCAAGAGTCGGTGCTGCTCGAAAGCATTGCCTACTGGAGCAAGTCCCATG CTTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CCACCGCACCAGCCAACTCACCGGCCTGCTGCTGCCCCTGGCCGACCGCCATCTGGTGCTACCCAACGTCGCCATCGCCGAACTGATCGACTTTCAGCGC GGCGAACCGGCCAGCGATGCACCGCCGTGGTATTTGCGGCAAGTGACCTGGCGCGATCGGCAAATCCCGTTGATCAGCTTCGAAGCGGTGTGCGGCGAGG CGAGTGTGACCGGCGAGCGCTCGCGCATTGTGGTGTTGAATGCCTTGGGGGGGCGGCCGACGCTGAAGTTTATTGCGCTGGTGATCCAGGGCATTCCCCG GTCGTACAAGCTTGATAGTGAATTGAGCTACGTGGACGTGCCGCTGTGCCCGCTGGAACTGGCGGCGGTGCAGGTGGGCGAGCATGTGGCGAAGGTGCCG GATCTCATGGGGCTTGAGGCCCTGCTGGTCGAATCCGGTTTGGCATAGATCCCTGTAGGAGCCGGCTTGCCGGCGATGACGGTCTGCCAGCCCACTCATT
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| Amino Acid Sequence |
>histidine kinase
MVDRHDYVALEWVKGDIAETLKQARSALDAYVETSDGDAISECLAAVHQVHGALQMVEFYGAALLVEEIEALALALQAAGVSQRDESIRLLQQALNQLPL YLDRVHSARRDLPLVVLPLLNDLRSARGESLLSETSLFSPQLLTIAPLPDEALAQRAVPDLKEQLRQWHQLLQQALAGLLREDHGPSNLEDMARVFARLE TLCQGAPLLPLWQVTSALVEGMLTGVIANSPALRSLLKASDKQLKRLLAQGIGGINQPAPDELLKSLLFYVAKVTRPTPRMQSLKERYGLDEALPDSALV DAERARLAGPDRNAMGSVLGALCEELVRVKERLDLFVRSDRQHTSDLDALLAPLRQIADTLAVLGFGQPRKVIIDQLAVVLSLVQGQREPNDAVLVDVAG ALLYVEATLAGMVGTVEPESREENRLPTTDLTQIHQLVIRESCQCLKQAKELVIDCIEADWDRQRLESLPELLSQVRGALAMIPLPRAASLMRGCTDYVD EQLMGNDAPPSEGQLAHFADVISSLEYYLERMLQDPDAAGERVLELATHGLAALGYLPAEKPWRQALVAPDGARAVEVTPSQSQFDALASPTSRLNPPAL QRPGSLLPPPADEEPIDDELREVFLEETDEVLEVLHRNLPNSADKIAQGEMRRVFHTLKGSGRMVRALVLAELAWAVENLLNRVLERSVTLGPDVQQVLD EAVALLPELIADFAIDDQRQRDEVDALAARAHALASGMPVPAAEPHDPMLLEIFRNEAQSHLDSLNHFLHQAAEHVPLQVSDELQRALHTLKGSAYMAGV LPIAELARPLDHLTREYKAHRLPLDLDEVELLLEAEGLFQRGLRDLDSDPLAPIKGAEDLINRTQSLLDHQLEALLDVRIKRDPQLIANFLAQGMDILLD AENLLRRWQQHPGERQELTALLDELTTLGEGAHVADLHAIDALCEALLDLYGAVEESSLAVSERFFHEAEQAHEALISMLDQLAAGQEISPAPARVEALR ELLDEALDPSATGLIKSDGSRVLSVSELGAATQQLDHETERDNEIVEIFLEEAVDILDSAGQSLKRWLLEPDNAAPLSSLQRDLHTLKGGARMAEIEAIG DLAHELECLYEGLVDRRYSYTAELSHVLMASHERLALQLEELHHHQPLSDSAELIARVRALRQGSAPAAPAAAPPASGADPELLDIFLEEAADILDSSSA ALSRWQAEPGNRQEVETLLRDLHTLKGGARMVEIAPIGDLAHELEFLYEGLSAGLLAPSPELFALLQGCHDRLAQMIDAVADGLPVGSVDKLIERIKTLV HPSDEPVTPVALPAGKAEAVVDPMADMVKISAELLDDLVNLAGETSIFRGRIEQQVNDARIALTEVETTIERMRDQLRRLDTETQGRILSRQQAEAERLG YEDFDPLEMDRHSQLQQLSRALSESASDLLDLKDTLERRNEDAHDLLQQQARINTELQEGLMRTRMVPFERMLPRLKRIVRQVAEELGKDVEFIVGNAEG EMDRNVLERMAAPLEHMLRNAVDHGLESRDARLLAGKPEKGRITLDLTHEGGDIVFDMRDDGAGVPLEAVRRKAIKRGLLDPNQDISDRDVLQFILQPGF STAEKITQISGRGVGMDVVHEEVRQLGGSMVIDSTPGEGVHFRIRLPFTVSVNRALMVQCADEQYAIPLNTIEGLVRVLPHELAGHYQQDPPRYEYAGQR YELFYLGDLLHTVSRPKLLGHYQPVPVLLVQCNERRVAIHVDAMAGTREIVVKGLGPQFAGVQGLSGATILGDGRVVLIIDLLAHIRARQPALPAQTADL PLILNDPLKKRPLLVLVVDDSVTVRKVTSRLLERNGMNVLTAKDGIDALAVLEEHTPDLMLLDIEMPRMDGFEVATQVRNDPRLMRLPIIMITSRTGQKH RDRAMAIGVNDYLGKPYQESVLLESIAYWSKSHA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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