Pseudomonas fluorescens PICF7, PFLUOLIPICF7_RS08760
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas fluorescens PICF7, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
GAAGCTGCATTACAGCGGCCATCTGTCCGCGCAAACCCGCTATCCCGACGGCCTGAAAGCCATTCTCGGCGAGTACTTCGGGCTGCCTGTGGAGATTGAA GAGTACGTCGGCCAATGGTTGGAGTTGCCCGAACGCAGCCGCGTCAGCGTGAGCGCCAACCGCCTGGGCGTGGACTTTTGCCTGGGCAGCTTCGTATGGG ACCGCCAGCACAAATTCCGTATCCGCCTGGGCCCGCTCACGCTGGAGGACTACATGGGCATGCTGCCCGGCCAACAGCCGTTCAACGAGCTGGTGGCGTG GGTGGCCGAGTACCTGGGCCATGAACTGGACTGGGACCTCAACCTGGTTTTGCAACAACCTGAAGTGCCGGCACTGCAACTCAACGGCCAGTTCCGCCTG GGCTTCAACACCTGGCTCGGTAGCCCTGCGCACGACGCCAACGACCTAATCCTGGCCCGGCATTACGCCGATCAGGCCACCACCTCAAGGAATCCAGAGC
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| DNA Sequence for Gene |
>PFLUOLIPICF7_RS08760
ATGGGTGAAATCAGTCGCGCCGCACTGTTCGGCAAACTCAACAGCGTGGCCTACAAGGCCATCGAAGCCGCCACCGTGTTCTGCAAGCTGCGGGGCAACC CGTATGTGGAACTGGCTCACTGGTTTCACCAGTTGCTGCAACTGCAGGACTCGGACCTGCACCGCATCATCCGTCAGTTCAACGTGGAGCCGGCGCGCCT GGCCCGTGACCTCACCGAAGCGCTGGATCGTTTGCCGCGTGGCTCGACCTCGATCACCGACCTGTCCTCGCATGTGGAAGAAGCGGTTGAGCGCGGCTGG GTCTACGGCAGCCTGATGTTCGGTGAAAGCCAAGTGCGCACCGGTTACTTTGTGCTCGGTATCTTGAAGACACCCAGCCTGCGTCATGCGTTGCTGGGCT TGTCGTCGGAATTCGACAAGATCAAGGCCGAAGCCCTGAGCGAGCGCTTTGACGAATACGTCGGCGATTCGCCGGAAAATGCCCTGAGCGCAAGCGACGG TTTCAACGCCGGCGCCGTTCCGGGCGAAGCCAGCGGTGCGATGGCGCCGAGTGCGATGGGCAAGCAGGAAGCCCTCAAGCGTTTCACGGTCGACCTGACC GAACAGGCGCGCAGCGGCAAACTCGACCCGATTGTTGGCCGTGATGAAGAAATCCGCCAACTGGTCGACATCCTCATGCGCCGCCGCCAGAACAACCCGA TCCTCACCGGTGAAGCCGGGGTGGGCAAGACCGCGGTGGTCGAAGGTTTCGCCCTGCGTATCGTCGCCGGTGACGTGCCGCCAGCATTGAAAGACGTGGA ACTGCGCAGCCTTGATGTGGGCCTGCTGCAAGCCGGCGCCAGCATGAAAGGCGAATTCGAACAGCGCCTGCGCCAGGTTATAGAAGACGTGCAGGCCTCG CCCAAGCCGATCATTCTGTTTATCGACGAAGCCCACACACTGGTGGGTGCCGGTGGTGCAGCCGGCACCGGTGATGCAGCCAACCTGCTCAAGCCGGCGT TGGCACGTGGCACCTTGCGCACCGTGGCCGCGACCACCTGGGCCGAGTACAAGAAGCACATCGAGAAGGACCCGGCGCTGACCCGGCGTTTCCAGGTGGT GCAAGTCGCCGAGCCGTCGGAGGACAAGGCGCTGCTGATGATGCGCGGCGTGGCGTCGACCATGGAAAAACACCACCAGGTGCAGATCCTCGATGAGGCG CTGGAAGCCTCGGTGAAGCTATCTCATCGCTACATTCCAGCGCGCCAGTTGCCGGACAAGTCCGTGAGCCTGCTGGACACCGCCTGCGCTCGCGTCGCCA TCAGCCTGCACGCGGTTCCGGCCGAAGTGGACGACAGCCGCCGTCGCATCGAAGCCCTGGAAACCGAGTTGCAGATCATCGCCCGCGAACACGCCATCGG CATTGCAATTGGTGCGCGCCAGACCAACACCGAGACGCTGTTGAGCGCTGAGCGTGAGCGTCTTGAAACCTTGGAAAGCCGTTGGGCTGAAGAGAAAGCG CTGGTAGATGAGTTGCTCGCCACCCGGGCAACGTTGCGCGAAAAAGTCGGTGTCGTGGACAGCCCTGCCGGCAACAACGAGAGCGATGAATTGCGCGCCC AGCTGGTCGACCTGCAACAACGCCTGACCGCGCTGCAAGGCGAAACCCCACTGATCCTGCCCACCGTGGATTACCAGGCCGTGGCCTCGGTGGTCGCCGA CTGGACCGGCATCCCGGTCGGCCGCATGGCGCGCAACGAGCTGGAAACGGTGCTCAACCTCGACCAGCACCTGAAGAAACGCATCATCGGCCAGGACCAC GCCCTGCAGATGATCGCCAAGCGCATCCAGACATCCCGCGCCGGCCTCGACAACCCGAGCAAGCCGATTGGCGTGTTCATGCTGGCCGGCACCTCCGGCG TGGGCAAGACCGAAACCGCCCTGGCCCTGGCCGAAGCCATGTACGGCGGCGAGCAGAACGTCATCACCATTAACATGAGCGAATTCCAGGAAGCCCATAC GGTGTCGACCCTCAAGGGCGCACCTCCGGGCTATATCGGCTACGGCGAAGGCGGCGTGCTGACCGAAGCGGTACGGCGCAAACCCTACAGCGTGGTGCTG CTGGATGAGGTGGAAAAAGCCCACCCGGACGTGCATGAAATCTTCTTCCAGGTGTTCGACAAGGGCGTGATGGAGGACGGCGAAGGCCGGGTGATCGACT TCAAGAACACCCTGATCCTGCTGACGACCAACGCCGGCACCGAGCTGATTTCCCAGGTGTGCAAAGACCCGGCGAACGTGCCGGAGCCGGAGGAAATCGC CAAGGCCCTGCGCCAGCCGCTGCTGGAGATTTTCCCGCCTGCGTTGCTCGGCCGCCTGGTAACCATCCCTTACTACCCGCTGAGCGACGAGATGCTCAAG GCAATCACCCGCCTGCAACTCAACCGCATCAAGAAGCGTGTGGAGACGACGCACAAAGTGGCCTTCGATTACGACGACGCGGTGGTCGACCTGATCGTCT CGCGTTGCACCGAGACCGAAAGCGGCGGGCGCATGATCGACACCATTCTCACCAACAGCCTGCTGCCGGACATGAGCCGTGAGTTCCTCACGCGCATGCT CGAAGGCAAGGCGTTGGCGGGGGTACGGATCAGCAGCCGGGATAATGAATTGCACTACGACTTCAGCGACGCAGATTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CCTGACGGAACACGGTCAAAATGTGGGAGCTGGCTTGCCTGCGATAGCGGTGTATCAGTCAACATCAATGTTGAATGTTCAATTGCTATCGCAGGCAAGC CAGCTCCCACATTGGATTCGGTTCCTTCAGTAATCAAGACCTTTACAGGACGCCCAATGCTATTCAACCAAGCCTCACGCCTGGCCAAGATCACCAGCCC CCTCGGGCCGGATGTGCTGCTGCTCAATGAAATGGGCGGCGGTGAAGAGCTGGGCAGGCTGTTCAACTATGAGCTGCAACTGACGTCCCTGGACGCCAAC ATCGACCTCAACCAGTTGCTCGGCAAGCCCATGAGCGTGGGCCTGCAACTGGCGGACGGAGGTGAGCGGCACTTTCACGGCATCGTCGCGCGGTGCAGCC AGAACATCGACCAGGGCCAGTTCGCCAGTTACCAGGTGACGCTGCGTCCTTGGTTGTGGCTGCTCAGCCGCACGTCCGACTGCCGGATTTTCCAGAACCT
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| Amino Acid Sequence |
>ATPase AAA
MGEISRAALFGKLNSVAYKAIEAATVFCKLRGNPYVELAHWFHQLLQLQDSDLHRIIRQFNVEPARLARDLTEALDRLPRGSTSITDLSSHVEEAVERGW VYGSLMFGESQVRTGYFVLGILKTPSLRHALLGLSSEFDKIKAEALSERFDEYVGDSPENALSASDGFNAGAVPGEASGAMAPSAMGKQEALKRFTVDLT EQARSGKLDPIVGRDEEIRQLVDILMRRRQNNPILTGEAGVGKTAVVEGFALRIVAGDVPPALKDVELRSLDVGLLQAGASMKGEFEQRLRQVIEDVQAS PKPIILFIDEAHTLVGAGGAAGTGDAANLLKPALARGTLRTVAATTWAEYKKHIEKDPALTRRFQVVQVAEPSEDKALLMMRGVASTMEKHHQVQILDEA LEASVKLSHRYIPARQLPDKSVSLLDTACARVAISLHAVPAEVDDSRRRIEALETELQIIAREHAIGIAIGARQTNTETLLSAERERLETLESRWAEEKA LVDELLATRATLREKVGVVDSPAGNNESDELRAQLVDLQQRLTALQGETPLILPTVDYQAVASVVADWTGIPVGRMARNELETVLNLDQHLKKRIIGQDH ALQMIAKRIQTSRAGLDNPSKPIGVFMLAGTSGVGKTETALALAEAMYGGEQNVITINMSEFQEAHTVSTLKGAPPGYIGYGEGGVLTEAVRRKPYSVVL LDEVEKAHPDVHEIFFQVFDKGVMEDGEGRVIDFKNTLILLTTNAGTELISQVCKDPANVPEPEEIAKALRQPLLEIFPPALLGRLVTIPYYPLSDEMLK AITRLQLNRIKKRVETTHKVAFDYDDAVVDLIVSRCTETESGGRMIDTILTNSLLPDMSREFLTRMLEGKALAGVRISSRDNELHYDFSDAD
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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